RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ASB10Q8WXI3 467 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 PP6455Q8WZ26 134 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 SH3BGRL2Q9UJC5 107 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 PLCE1Q9P212 2302 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 FIGNL2A6NMB9 653 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 MPTX1A8MV57 137 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF587BE7ETH6 402 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 MASP2O00187 686 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 DHRS3O75911 302 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 VAMP5O95183 116 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 HTD2P86397 168 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 PIGYQ3MUY2 71 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 RFESDQ8TAC1 157 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 PECRQ9BY49 303 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 PCOLCE2Q9UKZ9 415 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 MSGN1A6NI15 193 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 LRRC37A2A6NM11 1700 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 TMEM127O75204 238 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 MMP16P51512 607 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 SCAND1P57086 179 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 RNF212Q495C1 297 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 SPINK9Q5DT21 86 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 RBMS3Q6XE24 437 aaKnown RBP12.13□□□□□ -0.47
NFKB1-201ENST00000226574 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 OR2C3Q8N628 320 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 ADPRHL1Q8NDY3 354 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 RPS4Y2Q8TD47 263 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 CTHRC1Q96CG8 243 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 NRIP2Q9BQI9 281 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 ERRFI1Q9UJM3 462 aaPredicted RBP12.13□□□□□ -0.47
NFKB1-201ENST00000226574 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 CADP27708 2225 aa12.13□□□□□ -0.47
NFKB1-201ENST00000226574 ERVK-16P61578 105 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 PNLIPRP3Q17RR3 467 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 ISXQ2M1V0 245 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 JMJD6Q6NYC1 403 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-201ENST00000226574 ETV3LQ6ZN32 361 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 OVCH2Q7RTZ1 564 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 GLRX5Q86SX6 157 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 SLC35B3Q9H1N7 401 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 CACNA1BQ00975 2339 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 NUDT19A8MXV4 375 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 YIF1AO95070 293 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 FUT3P21217 361 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 GALNSP34059 522 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 PTGER4P35408 488 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 EFNB1P98172 346 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 MSMO1Q15800 293 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 RNF133Q8WVZ7 376 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 ANXA10Q9UJ72 324 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 BOKQ9UMX3 212 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-201ENST00000226574 RPH3ALQ9UNE2 315 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 KIR2DS1A0A191URI9 304 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 PDGFBP01127 241 aaPredicted RBP12.12□□□□□ -0.47
NFKB1-201ENST00000226574 SMIM10L1P0DMW3 83 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 ZBTB25P24278 435 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 ECI1P42126 302 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 KIR2DS4P43632 304 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 LRP11Q86VZ4 500 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 SMIM10Q96HG1 83 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF385AQ96PM9 386 aaKnown RBP12.12□□□□□ -0.47
NFKB1-201ENST00000226574 FOXB1Q99853 325 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 DEFB127Q9H1M4 99 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 HEXA-AS1Q9H8Q6 139 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 HDGFL3Q9Y3E1 203 aa12.12□□□□□ -0.47
NFKB1-201ENST00000226574 LIPT2A6NK58 231 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 DFFBO76075 338 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 IGHV4-34P06331 123 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ICAM2P13598 275 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 PSMB3P49720 205 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 RUNX1Q01196 453 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 THOC3Q96J01 351 aaKnown RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 CCDC74BQ96LY2 380 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 KLHDC3Q9BQ90 382 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 DVL1O14640 695 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 GCH1P30793 250 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF816Q0VGE8 651 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ZNF260Q3ZCT1 412 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 LPAR5Q9H1C0 372 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ATRXP46100 2492 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 INTS1Q8N201 2190 aaKnown RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 OR2M5A3KFT3 312 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 FGF2P09038 288 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 RPS4Y1P22090 263 aaKnown RBP12.11□□□□□ -0.47
NFKB1-201ENST00000226574 SELENOVP59797 346 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 CLN3Q13286 438 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 MPV17LQ2QL34 196 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 OR1F12Q8NHA8 337 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 ASB13Q8WXK3 278 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 SARGQ9BW04 601 aa12.11□□□□□ -0.47
NFKB1-201ENST00000226574 AURKAIP1Q9NWT8 199 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms