RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 IKZF1Q13422 519 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 WDR25Q64LD2 544 aaPredicted RBP12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 ZNF841Q6ZN19 808 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 ACP7Q6ZNF0 438 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 OR4M2Q8NGB6 313 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 DYNC2LI1Q8TCX1 351 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 TMED9Q9BVK6 235 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 RASL12Q9NYN1 266 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 MTCH1Q9NZJ7 389 aa12.23□□□□□ -0.45
PCOLCE-201ENST00000223061 ZFHX3Q15911 3703 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 SVEP1Q4LDE5 3571 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 F8VVB4 439 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 F8VWA3 439 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 DVL1O14640 695 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 CYB5AP00167 134 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 SELLP14151 372 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 AMY2BP19961 511 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 C11orf91Q3C1V1 193 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 LIPKQ5VXJ0 399 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 SLC36A1Q7Z2H8 476 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 FGFRL1Q8N441 504 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 ANGPTL6Q8NI99 470 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 ST8SIA4Q92187 359 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 UFD1Q92890 307 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 CEP19Q96LK0 163 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 BEX2Q9BXY8 128 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 TMEM160Q9NX00 188 aa12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.22□□□□□ -0.45
PCOLCE-201ENST00000223061 IGKV1D-17A0A075B6S4 117 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 A0A1B0GVG6 124 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 ZNF879B4DU55 563 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 MAGEB3O15480 346 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 ANGPTL7O43827 346 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 CRLF1O75462 422 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 ALX3O95076 343 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 CD1AP06126 327 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 PSG2P11465 335 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 HNF1AP20823 631 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 BMXP51813 675 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 PDZK1IP1Q13113 114 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 KISS1Q15726 138 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 CHRFAM7AQ494W8 412 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 ZNF529Q6P280 563 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 MKXQ8IYA7 352 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 S100ZQ8WXG8 99 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 GAFA1Q96PS6 74 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 NKX3-1Q99801 234 aaPredicted RBP12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 OCEL1Q9H607 264 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 KAAG1Q9UBP8 84 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 CKLFQ9UBR5 152 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 CDC42EP3Q9UKI2 254 aa12.21□□□□□ -0.45
PCOLCE-201ENST00000223061 MALRD1Q5VYJ5 2156 aa12.21□□□□□ -0.46
PCOLCE-201ENST00000223061 LOC105371242A0A075B767 164 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 RFPL4AA6NLU0 287 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 RFPL4AL1F8VTS6 287 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 AIREO43918 545 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 FCN3O75636 299 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 ACAA1P09110 424 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 CALCBP10092 127 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 BCL3P20749 454 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 NPBWR2P48146 333 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 CEBPDP49716 269 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 NPY4RP50391 375 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 ERVK11-1P61568 191 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 VBP1P61758 197 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 INSL4Q14641 139 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 ARMCX4Q5H9R4 360 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 ATPAF1Q5TC12 328 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 OR52N4Q8NGI2 321 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 NDNFQ8TB73 568 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 DERL3Q96Q80 235 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 GPER1Q99527 375 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 C7orf69Q9H7B7 122 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 RBFOX1Q9NWB1 397 aaKnown RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 OR14J1Q9UGF5 321 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 POLR3KQ9Y2Y1 108 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 A3GALT2U3KPV4 340 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 TRAV8-7A0A075B6U6 113 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 TRBV5-7A0A0A0MS05 114 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 C22orf46C9J442 243 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 NDUFB3O43676 98 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 TMEM225BP0DP42 221 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 GATA3P23771 443 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 IL13RA1P78552 427 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 MLLT11Q13015 90 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 ZNF846Q147U1 533 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 TIMM50Q3ZCQ8 353 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 CRIP3Q6Q6R5 217 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 ZNF788Q6ZQV5 615 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 USP43Q70EL4 1123 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 MS4A15Q8N5U1 240 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 EMG1Q92979 244 aaKnown RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 TMEM203Q969S6 136 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 MGLLQ99685 303 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 TMPRSS13Q9BYE2 586 aa12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 WDR12Q9GZL7 423 aaKnown RBP12.2□□□□□ -0.46
PCOLCE-201ENST00000223061 DNTTIP1Q9H147 329 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms