RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 NECAB3Q96P71 396 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-201ENST00000221930 CHST5Q9GZS9 411 aa13.34□□□□□ -0.27
TGFB1-201ENST00000221930 TMEM231Q9H6L2 316 aa13.34□□□□□ -0.27
TGFB1-201ENST00000221930 GPR173Q9NS66 373 aa13.34□□□□□ -0.27
TGFB1-201ENST00000221930 CCL4P13236 92 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 CEACAM6P40199 344 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 RAB5CP51148 216 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 ZNF468Q5VIY5 522 aaPredicted RBP13.33□□□□□ -0.27
TGFB1-201ENST00000221930 TMEM156Q8N614 296 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 HAS2Q92819 552 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 MARS2Q96GW9 593 aaKnown RBP13.33□□□□□ -0.27
TGFB1-201ENST00000221930 PIGQQ9BRB3 760 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 ZPBPQ9BS86 351 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 ULBP2Q9BZM5 246 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 WDR54Q9H977 334 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 PLEKHJ1Q9NW61 149 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 V9GYS6 101 aa13.33□□□□□ -0.27
TGFB1-201ENST00000221930 LOC400499M0QZD8 3231 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 A0A0J9YW62 118 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 A0A0U1RQV5 110 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 AP4M1O00189 453 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 FGF16O43320 207 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 F12P00748 615 aaPredicted RBP13.33□□□□□ -0.28
TGFB1-201ENST00000221930 PATE4P0C8F1 98 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 TMEM225BP0DP42 221 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 LIFP15018 202 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 HIST1H1BP16401 226 aaKnown RBP13.33□□□□□ -0.28
TGFB1-201ENST00000221930 ACKR3P25106 362 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 THBS4P35443 961 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 TAS2R46P59540 309 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 FAM189A2Q15884 450 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 DNLZQ5SXM8 178 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 C10orf128Q5T292 105 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 PRSS54Q6PEW0 395 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 TMEM123Q8N131 208 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 ZIC4Q8N9L1 334 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 TMEM54Q969K7 222 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 SCGB3A2Q96PL1 93 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 DKKL1Q9UK85 242 aa13.33□□□□□ -0.28
TGFB1-201ENST00000221930 SPRY1O43609 319 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-201ENST00000221930 MED6O75586 246 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 RRADP55042 308 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SEMA6DQ8NFY4 1073 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 OR10J5Q8NHC4 309 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 IFI44Q8TCB0 444 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 RNF141Q8WVD5 230 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 PP6455Q8WZ26 134 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 ZNF2Q9BSG1 426 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SEC11CQ9BY50 192 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SRXN1Q9BYN0 137 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 KLF7O75840 302 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SERPINA5P05154 406 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 ZNF883P0CG24 379 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 COX6A1P12074 109 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 CPT2P23786 658 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 FKBP2P26885 142 aaKnown RBP13.32□□□□□ -0.28
TGFB1-201ENST00000221930 MTCP1P56278 107 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SLC23A3Q6PIS1 610 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 BRICD5Q6PL45 260 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 OPN5Q6U736 354 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 DEFB123Q8N688 67 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 IMMP1LQ96LU5 166 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SMCO4Q9NRQ5 59 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 HS3ST3B1Q9Y662 390 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 NCOR1O75376 2440 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 FAM230AA0A1W2PPH8 454 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 ZNF705EA8MWA4 302 aaPredicted RBP13.32□□□□□ -0.28
TGFB1-201ENST00000221930 CFIP05156 583 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 NTF4P34130 210 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 PTGER4P35408 488 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 ALDH3B1P43353 468 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 CLN3Q13286 438 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 TAF9Q16594 264 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 C20orf196Q8IYI0 205 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 DTD1Q8TEA8 209 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 C2orf50Q96LR7 162 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 FAAP24Q9BTP7 215 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 TMEM100Q9NV29 134 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 WASF3Q9UPY6 502 aa13.32□□□□□ -0.28
TGFB1-201ENST00000221930 A0A087X0M5 115 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 A0A1B0GX30 115 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 NTN3O00634 580 aaPredicted RBP13.31□□□□□ -0.28
TGFB1-201ENST00000221930 MSTNO14793 375 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 FAM157CP0CG43 387 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 NQO2P16083 231 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 OTX1P32242 354 aaPredicted RBP13.31□□□□□ -0.28
TGFB1-201ENST00000221930 OPRM1P35372 400 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 DSCR4P56555 118 aaPredicted RBP13.31□□□□□ -0.28
TGFB1-201ENST00000221930 PKIAP61925 76 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 SLC16A14Q7RTX9 510 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 OR4A4PQ8NGN8 299 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 ANGPTL4Q9BY76 406 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 OPN3Q9H1Y3 402 aaPredicted RBP13.31□□□□□ -0.28
TGFB1-201ENST00000221930 LOC102723996A0A087X1L8 192 aa13.31□□□□□ -0.28
TGFB1-201ENST00000221930 CRYABP02511 175 aaKnown RBP13.31□□□□□ -0.28
TGFB1-201ENST00000221930 CD79AP11912 226 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms