RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 C11orf87Q6NUJ2 197 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 PIK3IP1Q96FE7 263 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 C10orf90Q96M02 699 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 THYN1Q9P016 225 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 GLI3P10071 1580 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 HAND1O96004 215 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 FUCA1P04066 466 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 COX6B1P14854 86 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 PRSS12P56730 875 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 VAMP3Q15836 100 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 ASCL3Q9NQ33 180 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 AP5S1Q9NUS5 200 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 CCL21O00585 134 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 HOXC4P09017 264 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 FGF8P55075 233 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 HOXA4Q00056 320 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 NHLH1Q02575 133 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 NHLH2Q02577 135 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 ZNF574Q6ZN55 896 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 NUFIP2Q7Z417 695 aaKnown RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 AUP1Q9Y679 476 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 OR3A1P47881 315 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 MIDNQ504T8 468 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 UQCC2Q9BRT2 126 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 OR6C3Q9NZP0 311 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 TCFL5Q9UL49 500 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 KIAA1551Q9HCM1 1747 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 TRAPPC2P0DI81 140 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 TRAPPC2BP0DI82 140 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 HOXB3P14651 431 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 BRS3P32247 399 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 TOMM34Q15785 309 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 WDR89Q96FK6 387 aaPredicted RBP9.85□□□□□ -0.83
KNOP1-201ENST00000219837 SLC45A2Q9UMX9 530 aa9.85□□□□□ -0.83
KNOP1-201ENST00000219837 SLC17A2O00624 439 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 FOXO1Q12778 655 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 IGHV5-10-1A0A0J9YXX1 117 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 IGHA1P01876 353 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 IGHA2P01877 340 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 HTR1DP28221 377 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 CADM3Q8N126 398 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 GPR137Q96N19 417 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 SAP30LQ9HAJ7 183 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 NIT2Q9NQR4 276 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 SPAARA0A1B0GVQ0 90 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 AKR7A2O43488 359 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 SEMA7AO75326 666 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 CTGFP29279 349 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 HLXQ14774 488 aaPredicted RBP9.84□□□□□ -0.83
KNOP1-201ENST00000219837 C12orf73Q69YU5 71 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 RHOFQ9HBH0 211 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 EXOGQ9Y2C4 368 aaKnown RBP9.84□□□□□ -0.83
KNOP1-201ENST00000219837 SFT2D2O95562 160 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 AVPR2P30518 371 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 TCTE3Q8IZS6 198 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 ZNF441Q8N8Z8 693 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 LINC01555Q8NAE3 123 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 CNTD2Q9H8S5 307 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 WBP1LQ9NX94 342 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 ORM1P02763 201 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 CT62P0C5K7 136 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 THSD4Q6ZMP0 1018 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 PDPNQ86YL7 162 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 CACNG5Q9UF02 275 aa9.84□□□□□ -0.83
KNOP1-201ENST00000219837 A0A1B0GTL3 188 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 NKX2-2O95096 273 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 SLC37A1P57057 533 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 ECSCRQ19T08 205 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 WDR74Q6RFH5 385 aaPredicted RBP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 VPS25Q9BRG1 176 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 KCNK15Q9H427 330 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 SBK3P0C264 359 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 OR5AC1P0C628 307 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 DYNLT3P51808 116 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 INSL4Q14641 139 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 ETFDHQ16134 617 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 FAM109BQ6ICB4 259 aaPredicted RBP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 DOLPP1Q86YN1 238 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 OR4A4PQ8NGN8 299 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 VAMP8Q9BV40 100 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 MSL2Q9HCI7 577 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 MED19A0JLT2 244 aaPredicted RBP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 TGOLN2O43493 480 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 TIAL1Q01085 375 aaKnown RBP eCLIP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 TBC1D26Q86UD7 250 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 OR10A7Q8NGE5 316 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 OR8B12Q8NGG6 310 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 PRSS3P2Q8NHM4 247 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 ANGPTL6Q8NI99 470 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 PTBP3O95758 552 aaKnown RBP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 ACTL6AO96019 429 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 GLDNQ6ZMI3 551 aaPredicted RBP9.83□□□□□ -0.84
KNOP1-201ENST00000219837 ZDHHC22Q8N966 263 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 SH2D2AQ9NP31 389 aa9.83□□□□□ -0.84
KNOP1-201ENST00000219837 KCNE1BA0A087WTH5 132 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms