RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NKX6-1P78426 367 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 GPR176Q14439 515 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 FBXL19-AS1Q494R0 122 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM108Q6UXF1 575 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 GDPD3Q7L5L3 318 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 CALHM1Q8IU99 346 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 ZSCAN4Q8NAM6 433 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 CHST4Q8NCG5 386 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 OR8G5Q8NG78 346 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 OR51T1Q8NGJ9 327 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 OR10R2Q8NGX6 335 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 OR8S1Q8NH09 359 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 RNASE6Q93091 150 aaKnown RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 RADILQ96JH8 1075 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 MICU1Q9BPX6 476 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 SPOCK3Q9BQ16 436 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 NUDT16L1Q9BRJ7 211 aaKnown RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 RTL8AQ9BWD3 113 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 SELENOIQ9C0D9 397 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 C11orf54Q9H0W9 315 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM100Q9NV29 134 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 IL36GQ9NZH8 169 aa11.18□□□□□ -0.62
PHGDH-221ENST00000641573 NOP16Q9Y3C1 178 aaKnown RBP11.18□□□□□ -0.62
PHGDH-221ENST00000641573 MAP1AP78559 2803 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-221ENST00000641573 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 NKX2-6A6NCS4 301 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 DPRXA6NFQ7 191 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 ORC5O43913 435 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF780AO75290 641 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-221ENST00000641573 CSTBP04080 98 aaKnown RBP11.17□□□□□ -0.62
PHGDH-221ENST00000641573 PTAFRP25105 342 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 PRSS3P35030 304 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 GDNFP39905 211 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 HAAOP46952 286 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF260Q3ZCT1 412 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 DNM1P46Q6ZS02 220 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 SLC25A26Q70HW3 274 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 SAXO1Q8IYX7 474 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 TOMM5Q8N4H5 51 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 FAM89BQ8N5H3 189 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF611Q8N823 705 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 OR56B1Q8NGI3 324 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 OR51F2Q8NH61 342 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 COX4I2Q96KJ9 171 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 ADAT1Q9BUB4 502 aaKnown RBP11.17□□□□□ -0.62
PHGDH-221ENST00000641573 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 TM2D1Q9BX74 207 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 SLC22A4Q9H015 551 aa11.17□□□□□ -0.62
PHGDH-221ENST00000641573 RBMX2Q9Y388 322 aaKnown RBP11.17□□□□□ -0.62
PHGDH-221ENST00000641573 FAM221AA4D161 298 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 SULT1C2O00338 296 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 SOCS1O15524 211 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 LYRM1O43325 122 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 SSX4O60224 188 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 GTF2F2P13984 249 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF250P15622 560 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 CPT2P23786 658 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 RFX2P48378 723 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 SRP9P49458 86 aaKnown RBP11.16□□□□□ -0.62
PHGDH-221ENST00000641573 RPS23P62266 143 aaKnown RBP11.16□□□□□ -0.62
PHGDH-221ENST00000641573 OR8G1Q15617 311 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 MSMPQ1L6U9 139 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 CDNFQ49AH0 187 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 MZT2BQ6NZ67 158 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 VHLLQ6RSH7 139 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 MEX3BQ6ZN04 569 aaKnown RBP11.16□□□□□ -0.62
PHGDH-221ENST00000641573 ZNF573Q86YE8 665 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 MKXQ8IYA7 352 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 AQP3Q92482 292 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 SLAMF9Q96A28 289 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 LRRC46Q96FV0 321 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 OR51I2Q9H344 312 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 ZMAT3Q9HA38 289 aaKnown RBP11.16□□□□□ -0.62
PHGDH-221ENST00000641573 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 NGBQ9NPG2 151 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 PCDHB16Q9NRJ7 776 aa11.16□□□□□ -0.62
PHGDH-221ENST00000641573 hCG_2014768A0A024R1R8 64 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 FOXI3A8MTJ6 420 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 H0YL77 283 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 H7C417 338 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 RBBP9O75884 186 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 ECDO95905 644 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 CYB5AP00167 134 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 SFTPBP07988 381 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 GSTT2BP0CG30 244 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 GNB3P16520 340 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 BSPH1Q075Z2 132 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 KLF9Q13886 244 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 PLAC9Q5JTB6 97 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 HAGHLQ6PII5 290 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 CCBE1Q6UXH8 406 aaPredicted RBP11.15□□□□□ -0.62
PHGDH-221ENST00000641573 Q6ZTK2 550 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 WDR86Q86TI4 376 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 RTN4RL2Q86UN3 420 aa11.15□□□□□ -0.62
PHGDH-221ENST00000641573 TMEM200AQ86VY9 491 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms