RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	NUDT16L1	Q9BRJ7	211 aa	Known RBP	13.17	□□□□□ -0.3
SPIN3-233	ENST00000640039	MND1	Q9BWT6	205 aa		13.17	□□□□□ -0.3
SPIN3-233	ENST00000640039		Q9H521	79 aa		13.17	□□□□□ -0.3
SPIN3-233	ENST00000640039	SMURF1	Q9HCE7	757 aa		13.17	□□□□□ -0.3
SPIN3-233	ENST00000640039	PCDHGB5	Q9Y5G0	923 aa		13.17	□□□□□ -0.3
SPIN3-233	ENST00000640039	AUP1	Q9Y679	476 aa		13.17	□□□□□ -0.3
SPIN3-233	ENST00000640039	IGKV1-27	A0A075B6S5	117 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	PNMA8C	A0A1B0GUJ8	204 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	SULT1B1	O43704	296 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	NOS1AP	O75052	506 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	ECD	O95905	644 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	LALBA	P00709	142 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	MT-ND2	P03891	347 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	PSG2	P11465	335 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	C11orf91	Q3C1V1	193 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	DMKN	Q6E0U4	476 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	SLC25A26	Q70HW3	274 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	MKX	Q8IYA7	352 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	BATF2	Q8N1L9	274 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	NANOGP1	Q8N7R0	232 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	ZFP41	Q8N8Y5	198 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	ZNF485	Q8NCK3	441 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	SPATA3	Q8NHX4	192 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	NANP	Q8TBE9	248 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	RGP1	Q92546	391 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	GHSR	Q92847	366 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	TMEM106A	Q96A25	262 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	CPNE2	Q96FN4	548 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	CEP19	Q96LK0	163 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	ZNF184	Q99676	751 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	NRIP2	Q9BQI9	281 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	CDCA4	Q9BXL8	241 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	RASSF4	Q9H2L5	321 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	METRN	Q9UJH8	293 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	BLOC1S6	Q9UL45	172 aa		13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	SIRT4	Q9Y6E7	314 aa	Predicted RBP	13.16	□□□□□ -0.3
SPIN3-233	ENST00000640039	KIR2DS1	A0A191URI9	304 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	C22orf46	C9J442	243 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	GPR37	O15354	613 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	SIGLEC5	O15389	551 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	MAGEB3	O15480	346 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	INMT	O95050	263 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	AVP	P01185	164 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	ACAA1	P09110	424 aa	Predicted RBP	13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	ADRA2C	P18825	462 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	RAB3A	P20336	220 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	SLC35A2	P78381	396 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	PAX2	Q02962	417 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	YIF1B	Q5BJH7	314 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	ARMCX4	Q5H9R4	360 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	RNLS	Q5VYX0	342 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	ZNF788	Q6ZQV5	615 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	C1QL2	Q7Z5L3	287 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039		Q8IYB0	196 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	PNLDC1	Q8NA58	520 aa	Known RBP	13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	SLAMF9	Q96A28	289 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	GAFA1	Q96PS6	74 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	CCDC90B	Q9GZT6	254 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	MXRA5	Q9NR99	2828 aa		13.15	□□□□□ -0.3
SPIN3-233	ENST00000640039	IGKV1D-17	A0A075B6S4	117 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039		A0A1B0GW55	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	RFPL4A	A6NLU0	287 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	RFPL4AL1	F8VTS6	287 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	RGS10	O43665	173 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	ALX3	O95076	343 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	LIPF	P07098	398 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L2	P0CJ85	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L3	P0CJ86	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L4	P0CJ87	422 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L5	P0CJ88	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L6	P0CJ89	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L7	P0CJ90	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	NDUFB7	P17568	137 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	CEL	P19835	753 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	CAPZA1	P52907	286 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	PPP3R1	P63098	170 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	BDH1	Q02338	343 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	PAX8	Q06710	450 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	RBM48	Q5RL73	367 aa	Known RBP	13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	FIP1L1	Q6UN15	594 aa	Known RBP	13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	BTN2A1	Q7KYR7	527 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	TMEM185A	Q8NFB2	350 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	H1FX	Q92522	213 aa	Known RBP	13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	RFT1	Q96AA3	541 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	SPACA5	Q96QH8	159 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	HES4	Q9HCC6	221 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	CKLF	Q9UBR5	152 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	DUX4	Q9UBX2	424 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	OR14J1	Q9UGF5	321 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	OPN4	Q9UHM6	478 aa		13.14	□□□□□ -0.31
SPIN3-233	ENST00000640039	KNG1	P01042	644 aa		13.13	□□□□□ -0.31
SPIN3-233	ENST00000640039	TFF1	P04155	84 aa		13.13	□□□□□ -0.31
SPIN3-233	ENST00000640039	SELL	P14151	372 aa		13.13	□□□□□ -0.31
SPIN3-233	ENST00000640039	AMY2B	P19961	511 aa		13.13	□□□□□ -0.31
SPIN3-233	ENST00000640039	CRHBP	P24387	322 aa		13.13	□□□□□ -0.31
SPIN3-233	ENST00000640039	EEF1B2	P24534	225 aa	Known RBP	13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms