RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 NMRAL1Q9HBL8 299 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 B3GNT2Q9NY97 397 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CD274Q9NZQ7 290 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 DPM3Q9P2X0 92 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ONECUT1Q9UBC0 465 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 RIMS3Q9UJD0 308 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 CFL2Q9Y281 166 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF337Q9Y3M9 751 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 DYSFO75923 2080 aa1.87□□□□□ -2.11
SMARCB1-208ENST00000634926 STARD9Q9P2P6 4700 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 AGRNO00468 2067 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 STAB2Q8WWQ8 2551 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 LOC100131303A0A0U1RQF7 123 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 DPRXA6NFQ7 191 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 KIF2AO00139 706 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 MANBAO00462 879 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 FCN1O00602 326 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 UBFD1O14562 309 aaKnown RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CXCL13O43927 109 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PRKYO43930 277 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 RAMP3O60896 148 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 GPX5O75715 221 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CIB2O75838 187 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 UTS2O95399 124 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 H6PDO95479 791 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CLDN9O95484 217 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 OXSR1O95747 527 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 OTCP00480 354 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 IL3P08700 152 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 FOLR2P14207 255 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PGAM2P15259 253 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 BCL3P20749 454 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PTBP1P26599 531 aaKnown RBP eCLIP1.86□□□□□ -2.112e-9■■■■■ 39.5
SMARCB1-208ENST00000634926 IL12BP29460 328 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 LCN1P31025 176 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 DEKP35659 375 aaKnown RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 RPL29P47914 159 aaKnown RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SERPINB8P50452 374 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PRKXP51817 358 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 FOXA1P55317 472 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 MRPS22P82650 360 aaKnown RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF117Q03924 483 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 BSPH1Q075Z2 132 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 BST1Q10588 318 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 FOXF1Q12946 379 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 TSC22D1Q15714 1073 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 NRF1Q16656 503 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 FAM83EQ2M2I3 478 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CHRFAM7AQ494W8 412 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SPIN4Q56A73 249 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF678Q5SXM1 525 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PRAMEF5Q5TYX0 476 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PRAMEF6Q5VXH4 476 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 LIPNQ5VXI9 398 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 RAET1LQ5VY80 246 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 OLFML2AQ68BL7 652 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 OR5M10Q6IEU7 315 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 TMEM107Q6UX40 140 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 C2orf66Q6UXQ4 117 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PAGE2Q7Z2X7 111 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 DHDDSQ86SQ9 333 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 TGIF2LXQ8IUE1 241 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 EGFL6Q8IUX8 553 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC35F2Q8IXU6 374 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 FAM9CQ8IZT9 166 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 MTURNQ8N3F0 131 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SVOPLQ8N434 492 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF525Q8N782 197 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 POM121L12Q8N7R1 296 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 OR5M1Q8NGP8 315 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 OR2V1Q8NHB1 315 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 MAGEE2Q8TD90 523 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 C10orf105Q8TEF2 133 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 C16orf78Q8WTQ4 265 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PYROXD1Q8WU10 500 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 ABHD3Q8WU67 409 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 DCAKDQ8WVC6 231 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 TCTEX1D2Q8WW35 142 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CPNE4Q96A23 557 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 RASD2Q96D21 266 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 L3HYPDHQ96EM0 354 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 C1orf147Q96MC9 270 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 RNF145Q96MT1 663 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 MS4A4EQ96PG1 132 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC38A2Q96QD8 506 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 SOSTQ9BQB4 213 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CENPKQ9BS16 269 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 CHRDL1Q9BU40 450 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 C19orf24Q9BVV8 132 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 GPR61Q9BZJ8 451 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 ROPN1BQ9BZX4 212 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 DSN1Q9H410 356 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 YY1AP1Q9H869 796 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 POLE4Q9NR33 117 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 NANSQ9NR45 359 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 GLRX2Q9NS18 164 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PAK1IP1Q9NWT1 392 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 PAQR5Q9NXK6 330 aaPredicted RBP1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 GIN1Q9NXP7 522 aa1.86□□□□□ -2.11
SMARCB1-208ENST00000634926 MED11Q9P086 117 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms