RNA–Protein interactions for RNA: ENST00000628346.2

DNM1-213, Transcript of dynamin 1, human

APPRIS ALT1 TSL 5 BASIC

Gene DNM1, Length 3,835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNM1-213	ENST00000628346	PDGFB	P01127	241 aa	Predicted RBP	11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	NTF3	P20783	257 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	IL12B	P29460	328 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	GNRHR	P30968	328 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	SLC18B1	Q6NT16	456 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	OR14L1P	Q8NHC6	308 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	MRGPRX4	Q96LA9	322 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	RNF150	Q9ULK6	438 aa		11.23	□□□□□ -0.61
DNM1-213	ENST00000628346	IGLV3-16	A0A075B6K0	115 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	TP53I11	O14683	189 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	DANCR	P0C864	163 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	GALR1	P47211	349 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	GLIPR1	P48060	266 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	GNB2	P62879	340 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	PDCD1	Q15116	288 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	LINC01555	Q8NAE3	123 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	RPS16	P62249	146 aa	Known RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	ZNF77	Q15935	545 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	ABHD17C	Q6PCB6	329 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	KCTD18	Q6PI47	426 aa	Predicted RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	FAM57B	Q71RH2	274 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	TMEM256	Q8N2U0	113 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	ZNF514	Q96K75	400 aa	Predicted RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	TMEM59	Q9BXS4	323 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	WFDC1	Q9HC57	220 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	TMEM14A	Q9Y6G1	99 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	NSG1	A0A0A6YYJ2	146 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	SMPD2	O60906	423 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	LINC00271	P0C7V0	271 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	THBS4	P35443	961 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	HNRNPA1L2	Q32P51	320 aa	Known RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	LFNG	Q8NES3	379 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	OR5C1	Q8NGR4	320 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	MS4A6E	Q96DS6	147 aa		11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	LIN37	Q96GY3	246 aa	Predicted RBP	11.22	□□□□□ -0.61
DNM1-213	ENST00000628346	TTR	P02766	147 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	ZNF93	P35789	620 aa	Predicted RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	PIGP	P57054	158 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	HIST1H3A	P68431	136 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	DCAF10	Q5QP82	559 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	SLC16A14	Q7RTX9	510 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	HLA-C	Q95604	372 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	PHPT1	Q9NRX4	125 aa	Predicted RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	TMED3	Q9Y3Q3	217 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	TPR	P12270	2363 aa	Known RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	PMCH	P20382	165 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	FAM53B	Q14153	422 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	C1QL3	Q5VWW1	255 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	C16orf82	Q7Z2V1	217 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	C1QL4	Q86Z23	238 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	C20orf196	Q8IYI0	205 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	BEND2	Q8NDZ0	799 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	CADM4	Q8NFZ8	388 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	OR52R1	Q8NGF1	315 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	APH1A	Q96BI3	265 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	CCDC3	Q9BQI4	270 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	HSPB9	Q9BQS6	159 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	PLK3	Q9H4B4	646 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	ENTPD2	Q9Y5L3	495 aa		11.21	□□□□□ -0.61
DNM1-213	ENST00000628346	MDC1	Q14676	2089 aa	Known RBP	11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	CDC14C	A4D256	554 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	NXPH2	O95156	264 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	IL18BP	O95998	194 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	MSX1	P28360	303 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	HSD11B1	P28845	292 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	SLC6A9	P48067	706 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	DPY19L2P2	Q6ZN68	376 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	PGAM5	Q96HS1	289 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	LRRC3B	Q96PB8	259 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	OR52A1	Q9UKL2	312 aa		11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.21	□□□□□ -0.62
DNM1-213	ENST00000628346	LOC101059948	A0A1B0GTJ6	334 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	TMEM127	O75204	238 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	GCG	P01275	180 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	TK1	P04183	234 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	CDC34	P49427	236 aa	Predicted RBP	11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	INSM1	Q01101	510 aa	Predicted RBP	11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	DEFB110	Q30KQ9	67 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	WWTR1	Q9GZV5	400 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	APOBEC3B	Q9UH17	382 aa	Known RBP	11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	MRPS28	Q9Y2Q9	187 aa	Known RBP	11.2	□□□□□ -0.62
DNM1-213	ENST00000628346		E5RGE8	158 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	ST8SIA3	O43173	380 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	APOD	P05090	189 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	OR5AC1	P0C628	307 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	MGAT2	Q10469	447 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	TMEM230	Q96A57	120 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	FAM122A	Q96E09	287 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	LRIT1	Q9P2V4	623 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	OSGIN2	Q9Y236	505 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	NSG2	Q9Y328	171 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.2	□□□□□ -0.62
DNM1-213	ENST00000628346	CHD9	Q3L8U1	2897 aa		11.2	□□□□□ -0.62
DNM1-213	ENST00000628346		A0A0A6YYD5	115 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms