RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-262	ENST00000628078	RIDA	P52758	137 aa	Known RBP	10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	C11orf88	Q6PI97	169 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	ZNF679	Q8IYX0	411 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	TPRX1	Q8N7U7	411 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	MUC13	Q9H3R2	512 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	ABCB10	Q9NRK6	738 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	SLC22A13	Q9Y226	551 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	TCF19	Q9Y242	345 aa		10.89	□□□□□ -0.67
TCF4-262	ENST00000628078	PQLC2L	A1A4F0	135 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078		A6NDX4	124 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	FAM90A8P	A6NJQ4	464 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	ADARB2-AS1	A8MUL3	147 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	C17orf98	A8MV24	154 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	LOC110117498-PIK3R3	F6TDL0	507 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	PRKY	O43930	277 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	DHRS3	O75911	302 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	RPP14	O95059	124 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	IGLV3-1	P01715	115 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	IGLL1	P15814	213 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	CD24	P25063	80 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	DLX6	P56179	175 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	LOXL3	P58215	753 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	CXCR4	P61073	352 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	CBX1	P83916	185 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	EMX1	Q04741	257 aa	Predicted RBP	10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	EDDM3A	Q14507	147 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	CNN3	Q15417	329 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	AANAT	Q16613	207 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	CLVS2	Q5SYC1	327 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	DEGS2	Q6QHC5	323 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	KRT74	Q7RTS7	529 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	ZNF573	Q86YE8	665 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	ARHGAP24	Q8N264	748 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	OR14K1	Q8NGZ2	314 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	PHF21A	Q96BD5	680 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	ASB9	Q96DX5	294 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	TBX5	Q99593	518 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	NRIP2	Q9BQI9	281 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	PRSS22	Q9GZN4	317 aa		10.88	□□□□□ -0.67
TCF4-262	ENST00000628078	NUFIP1	Q9UHK0	495 aa	Known RBP	10.88	□□□□□ -0.67
TCF4-262	ENST00000628078		A0A1B0GTI1	187 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	ARRDC5	A6NEK1	342 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	ACOD1	A6NK06	481 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	SRSF10	O75494	262 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	ATP6V1B1	P15313	513 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	CRISP1	P54107	249 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	SNU13	P55769	128 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	SLC34A1	Q06495	639 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	ZNF829	Q3KNS6	432 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	BCL2L15	Q5TBC7	163 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	SPATA24	Q86W54	205 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	OR4S1	Q8NGB4	309 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	RPS4Y2	Q8TD47	263 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	SLAMF9	Q96A28	289 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	CADM1	Q9BY67	442 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	SLC25A19	Q9HC21	320 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	OR52A1	Q9UKL2	312 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078		V9GYS6	101 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078	NOTCH3	Q9UM47	2321 aa		10.87	□□□□□ -0.67
TCF4-262	ENST00000628078		K7N7A8	449 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	NOS1AP	O75052	506 aa	Predicted RBP	10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ZNF254	O75437	659 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	MPIG6B	O95866	241 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ZNF728	P0DKX0	622 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ANXA8	P13928	327 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	DUSP1	P28562	367 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ACTA2	P62736	377 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ACTG2	P63267	376 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ACTC1	P68032	377 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ACTA1	P68133	377 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ROM1	Q03395	351 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	PTGES3	Q15185	160 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	FOXB2	Q5VYV0	432 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ZNF322	Q6U7Q0	402 aa	Predicted RBP	10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	BAIAP2L2	Q6UXY1	529 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	LIAT1	Q6ZQX7	453 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	GDPD3	Q7L5L3	318 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	NDUFA11	Q86Y39	141 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	SLC35F2	Q8IXU6	374 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ELMOD2	Q8IZ81	293 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	OR13D1	Q8NGV5	346 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	NDNF	Q8TB73	568 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	ASB17	Q8WXJ9	295 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	MALSU1	Q96EH3	234 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	CNN2	Q99439	309 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	TEX12	Q9BXU0	123 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	CHST6	Q9GZX3	395 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	HES4	Q9HCC6	221 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	NECAP2	Q9NVZ3	263 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	MTCH1	Q9NZJ7	389 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	IL36RN	Q9UBH0	155 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	POLDIP2	Q9Y2S7	368 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	DSCAML1	Q8TD84	2053 aa		10.86	□□□□□ -0.67
TCF4-262	ENST00000628078	IGKV1-27	A0A075B6S5	117 aa		10.85	□□□□□ -0.67
TCF4-262	ENST00000628078	TMEM82	A0PJX8	343 aa		10.85	□□□□□ -0.67
TCF4-262	ENST00000628078	FAM172BP	A6NC97	362 aa		10.85	□□□□□ -0.67
TCF4-262	ENST00000628078	SH2D7	A6NKC9	451 aa	Predicted RBP	10.85	□□□□□ -0.67
TCF4-262	ENST00000628078	VGLL3	A8MV65	326 aa		10.85	□□□□□ -0.67
TCF4-262	ENST00000628078	ODF3B	A8MYP8	253 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms