RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 MPPED2Q15777 294 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 BAK1Q16611 211 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 SPRNQ5BIV9 151 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 ASCL4Q6XD76 172 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 GDPD3Q7L5L3 318 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 SAXO1Q8IYX7 474 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 DRAXINQ8NBI3 349 aaPredicted RBP15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 KCNG3Q8TAE7 436 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 DIRAS2Q96HU8 199 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 NEURL2Q9BR09 285 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 TLNRD1Q9H1K6 362 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 ADAM30Q9UKF2 790 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 TBC1D24Q9ULP9 559 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 DSCAMO60469 2012 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 LDLRAD4O15165 306 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 TPD52L2O43399 206 aaKnown RBP15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 RHBDL1O75783 438 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 HTR3BO95264 441 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 EIF4EP06730 217 aaKnown RBP15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 CD55P08174 381 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 SOD3P08294 240 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 EFNB2P52799 333 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 ART1P52961 327 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 CCL8P80075 99 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 QRFPP83859 136 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 TLE4Q04727 773 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 UNC119Q13432 240 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 OR2W3Q7Z3T1 314 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 BATF2Q8N1L9 274 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 SLC25A38Q96DW6 304 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 CST11Q9H112 138 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 CLEC4MQ9H2X3 399 aaPredicted RBP15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 BANF2Q9H503 90 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 POLDIP2Q9Y2S7 368 aa15.09■□□□□ 0.01
PTCHD3-202ENST00000622555 A0A1W2PP11 408 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 TMEM14DPA8MWL7 114 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 TRAPPC2LH3BP13 241 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 PTBP3O95758 552 aaKnown RBP15.08■□□□□ 0
PTCHD3-202ENST00000622555 MPIG6BO95866 241 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 CD8AP01732 235 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 CSTBP04080 98 aaKnown RBP15.08■□□□□ 0
PTCHD3-202ENST00000622555 DANCRP0C864 163 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 IL7P13232 177 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 SPNP16150 400 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 ELK1P19419 428 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 GPR176Q14439 515 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 FAM209AQ5JX71 171 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 FAM131AQ6UXB0 335 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 ZNF826PQ6ZT77 177 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 DTX2Q86UW9 622 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 TMEM200AQ86VY9 491 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 LRRC28Q86X40 367 aaPredicted RBP15.08■□□□□ 0
PTCHD3-202ENST00000622555 C11orf53Q8IXP5 236 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 TMEM104Q8NE00 496 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 VRK1Q99986 396 aaPredicted RBP15.08■□□□□ 0
PTCHD3-202ENST00000622555 GAL3ST1Q99999 423 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 EGLN1Q9GZT9 426 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 DECR2Q9NUI1 292 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 C1orf123Q9NWV4 160 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 IL36GQ9NZH8 169 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 MTCH1Q9NZJ7 389 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 FBLN5Q9UBX5 448 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 RAB22AQ9UL26 194 aa15.08■□□□□ 0
PTCHD3-202ENST00000622555 hCG_1807616A0A1W2PRN6 198 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 CDC14BO60729 498 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 ZNF780AO75290 641 aaPredicted RBP15.07■□□□□ 0
PTCHD3-202ENST00000622555 KDM4BO94953 1096 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 APOA1P02647 267 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 SFTPBP07988 381 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 RAB6AP20340 208 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 BCL3P20749 454 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 COL8A1P27658 744 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 NPBWR2P48146 333 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 PPOXP50336 477 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 TESK1Q15569 626 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 PCGF3Q3KNV8 242 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 C11orf71Q6IPW1 123 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 MOGAT3Q86VF5 341 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 CMTM4Q8IZR5 234 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 CADM3Q8N126 398 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 PTX4Q96A99 478 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 ZNF488Q96MN9 340 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 CMTM3Q96MX0 182 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 TMEM59Q9BXS4 323 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 FN3KRPQ9HA64 309 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 PCDHB16Q9NRJ7 776 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 FBXO9Q9UK97 447 aaPredicted RBP15.07■□□□□ 0
PTCHD3-202ENST00000622555 LAMP3Q9UQV4 416 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 DYSFO75923 2080 aa15.07■□□□□ 0
PTCHD3-202ENST00000622555 MGMTP16455 207 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 TNFRSF1AP19438 455 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 GATA4P43694 442 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 CNIH2Q6PI25 160 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 WDR82Q6UXN9 313 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 OR8H2Q8N162 312 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 TRAF4Q9BUZ4 470 aaPredicted RBP15.06■□□□□ 0
PTCHD3-202ENST00000622555 ATG5Q9H1Y0 275 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 ABCG5Q9H222 651 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 SAP30LQ9HAJ7 183 aa15.06■□□□□ 0
PTCHD3-202ENST00000622555 HLA-DQB1P01920 261 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms