RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 LYRM2Q9NU23 88 aaPredicted RBP7□□□□□ -1.29
VPS11-209ENST00000622309 HEATR5AQ86XA9 2040 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 CDC14CA4D256 554 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 H3BNC9 293 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 K7N7A8 449 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 MMP9P14780 707 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 RBMXP38159 391 aaKnown RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 ICAM4Q14773 271 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 VAMP3Q15836 100 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 METRNLQ641Q3 311 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 WDR25Q64LD2 544 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 RFLNAQ6ZTI6 216 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 TMEM156Q8N614 296 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 ZFP62Q8NB50 900 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 OR2G3Q8NGZ4 309 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 BADQ92934 168 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 GLYATL1Q969I3 302 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 RPUSD4Q96CM3 377 aaKnown RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 ZNF48Q96MX3 618 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 CCDC3Q9BQI4 270 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 RAB9BQ9NP90 201 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 ZNF701Q9NV72 531 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 AK3Q9UIJ7 227 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 YIPF1Q9Y548 306 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 KIF26AQ9ULI4 1882 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 DCDC2BA2VCK2 349 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 NPIPB15A6NHN6 443 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 SAP30O75446 220 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 RBMXL2O75526 392 aaKnown RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 ERVS71-1P61550 626 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 MPV17LQ2QL34 196 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 ZNF595Q8IYB9 648 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 KLHDC8AQ8IYD2 350 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 CSNK1A1LQ8N752 337 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 NPEPL1Q8NDH3 523 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 OR5L1Q8NGL2 311 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 WDR34Q96EX3 536 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 BOD1Q96IK1 185 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 NUDT9Q9BW91 350 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 C5orf66Q9H5L9 145 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 KIR3DX1Q9H7L2 352 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 MTHFD2LQ9H903 347 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 OBP2BQ9NPH6 170 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 TMEM9BQ9NQ34 198 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 CGGBP1Q9UFW8 167 aaPredicted RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 GPR132Q9UNW8 380 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 SCN5AQ14524 2016 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 A0A0C4DFX4 3053 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 IGLV3-16A0A075B6K0 115 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 TMEM202A6NGA9 273 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 AQP7P3A6NL99 342 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 PRR32B1ATL7 298 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 E5RGE8 158 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 K7ERU9 68 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 GPR137BO60478 399 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 UPK3AO75631 287 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 TOMM40O96008 361 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 IGLV3-27P01718 113 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 KLKB1P03952 638 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 BSGP35613 385 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 IL15RAQ13261 267 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 POM121L1PQ3SYA9 428 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 FAM78AQ5JUQ0 283 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 AGBL4Q5VU57 503 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 TMEM64Q6YI46 380 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 AMZ2Q86W34 360 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 NUP43Q8NFH3 380 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 ZNRF4Q8WWF5 429 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 TMEM230Q96A57 120 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 CST9LQ9H4G1 147 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 MRM2Q9UI43 246 aaKnown RBP6.99□□□□□ -1.29
VPS11-209ENST00000622309 SERTAD3Q9UJW9 196 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 NSG2Q9Y328 171 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 INSL6Q9Y581 213 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 COX11Q9Y6N1 276 aa6.99□□□□□ -1.29
VPS11-209ENST00000622309 COL4A4P53420 1690 aaPredicted RBP6.98□□□□□ -1.29
VPS11-209ENST00000622309 TMPRSS11DO60235 418 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 NDUFB2O95178 105 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 CD160O95971 181 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 TMEM225BP0DP42 221 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 SERPINA4P29622 427 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 PTGER4P35408 488 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 CNN1P51911 297 aaKnown RBP6.98□□□□□ -1.29
VPS11-209ENST00000622309 FAM3BP58499 235 aaPredicted RBP6.98□□□□□ -1.29
VPS11-209ENST00000622309 GNB2P62879 340 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 ZNF92Q03936 586 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 CDKN3Q16667 212 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 TDRG1Q3Y452 100 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 ZNF506Q5JVG8 444 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 TMEM184AQ6ZMB5 413 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 RD3Q7Z3Z2 195 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 TMEM45BQ96B21 275 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 RSPRY1Q96DX4 576 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 KTI12Q96EK9 354 aaPredicted RBP6.98□□□□□ -1.29
VPS11-209ENST00000622309 MRGPRX1Q96LB2 322 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 MS4A5Q9H3V2 200 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 WFDC1Q9HC57 220 aa6.98□□□□□ -1.29
VPS11-209ENST00000622309 C1orf123Q9NWV4 160 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms