RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PRSS23O95084 383 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 OR3A4PP47883 348 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 TESK1Q15569 626 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 SP6Q3SY56 376 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 KRBOX4Q5JUW0 171 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 MRGPRGQ86SM5 289 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 FRZBQ92765 325 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 BOLA1Q9Y3E2 137 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 XRCC3O43542 346 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 LRP3O75074 770 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 TGM6O95932 706 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 ZNF17P17021 662 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 S100A7P31151 101 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 HOXA6P31267 233 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 OR3A1P47881 315 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 CDONQ4KMG0 1287 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 INO80CQ6PI98 192 aaPredicted RBP8.14□□□□□ -1.11
GGA3-223ENST00000621870 ZNF767PQ75MW2 155 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 CCDC28AQ8IWP9 274 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 ADIPOR1Q96A54 375 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 DAZAP1Q96EP5 407 aaKnown RBP8.14□□□□□ -1.11
GGA3-223ENST00000621870 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 DDOQ99489 341 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 LIN7CQ9NUP9 197 aaKnown RBP8.14□□□□□ -1.11
GGA3-223ENST00000621870 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 LOC285556D6RIA3 1793 aa8.14□□□□□ -1.11
GGA3-223ENST00000621870 TRAV38-1A0A0B4J264 116 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 TO15178 435 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 PDCD6O75340 191 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 B3GALNT1O75752 331 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 EFEMP2O95967 443 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CST2P09228 141 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CSRP1P21291 193 aaKnown RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 OR4C16Q8NGL9 310 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 BORCS7Q96B45 105 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 YIPF6Q96EC8 236 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 PARP12Q9H0J9 701 aaKnown RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 ARV1Q9H2C2 271 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CXXC4Q9H2H0 198 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ZGRF1Q86YA3 2104 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 hADV38S2A0JD32 116 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 AQP7O14520 342 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 NGFRP08138 427 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 IAPPP10997 89 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 SSTP61278 116 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ERHP84090 104 aaKnown RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 ZNF85Q03923 595 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 HLXQ14774 488 aaPredicted RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 Q6ZRG5 221 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CATSPERDQ86XM0 798 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CNTD2Q9H8S5 307 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 FAM212BQ9NTI7 297 aaPredicted RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 KIF26BQ2KJY2 2108 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 A1L4Q6 167 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CRYM-AS1A6NIL9 109 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 C17orf112F2Z3M2 114 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 SMLR1H3BR10 107 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 OR5G3P0C626 314 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ZBTB25P24278 435 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 FGF9P31371 208 aaPredicted RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 CEACAM6P40199 344 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ELLP55199 621 aaPredicted RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 SNRPNP63162 240 aaKnown RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 FUT5Q11128 374 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ZNF266Q14584 549 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 P2RY6Q15077 328 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 IL34Q6ZMJ4 242 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 APCDD1LQ8NCL9 501 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 SLC26A10Q8NG04 563 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 TERB2Q8NHR7 220 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ZPLD1Q8TCW7 415 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 SSX3Q99909 188 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 BRCA2P51587 3418 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 AQP8O94778 261 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 OR2F2O95006 317 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ADH4P08319 380 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ALDH3B1P43353 468 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 OPCMLQ14982 345 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 ZNF239Q16600 458 aaKnown RBP8.13□□□□□ -1.11
GGA3-223ENST00000621870 C17orf107Q6ZR85 190 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 LINC00299Q6ZSB3 139 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 CTHRC1Q96CG8 243 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 UQCC2Q9BRT2 126 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 PRSS50Q9UI38 385 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 KCNE5Q9UJ90 142 aa8.13□□□□□ -1.11
GGA3-223ENST00000621870 MKI67P46013 3256 aaKnown RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 TRAV39A0A0B4J263 110 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 A0A0D9SG52 128 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 TMEM200CA6NKL6 621 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 LINC00271P0C7V0 271 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 ZNF14P17017 642 aaPredicted RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 SNTB1Q13884 538 aaKnown RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 SSX1Q16384 188 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 RFPL4BQ6ZWI9 263 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 TIPARPQ7Z3E1 657 aaKnown RBP8.12□□□□□ -1.11
GGA3-223ENST00000621870 SMIM4Q8WVI0 70 aa8.12□□□□□ -1.11
GGA3-223ENST00000621870 SIGLEC12Q96PQ1 595 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms