RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 NDUFB7P17568 137 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 KIR2DL3P43628 341 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 OR3A4PP47883 348 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 COL19A1Q14993 1142 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 ADIRFQ15847 76 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 LFNGQ8NES3 379 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 OR51A4Q8NGJ6 313 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 HPSE2Q8WWQ2 592 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 DHRS9Q9BPW9 319 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
CIITA-213ENST00000618327 MEIKINA0A087WXM9 373 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 IGLV1-36A0A0B4J1U3 117 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 A0A1W2PNV4 684 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 FUT3P21217 361 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 HNF4GQ14541 408 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 PLGLAQ15195 96 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 GLCCI1Q86VQ1 547 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 ICE1Q9Y2F5 2266 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 PRR33A8MZF0 331 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 CEACAM1P13688 526 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 CD59P13987 128 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 TGM1P22735 817 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 PPP1CBP62140 327 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 RPS4XP62701 263 aaKnown RBP12.22□□□□□ -0.45
CIITA-213ENST00000618327 ACACAQ13085 2346 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 OR13C7P0DN81 318 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 CD80P33681 288 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 UCNP55089 124 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 HABP2Q14520 560 aaPredicted RBP12.22□□□□□ -0.45
CIITA-213ENST00000618327 ALKBH6Q3KRA9 238 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 RHOUQ7L0Q8 258 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 RIMS4Q9H426 269 aaPredicted RBP12.22□□□□□ -0.45
CIITA-213ENST00000618327 TRAV8-7A0A075B6U6 113 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 HSD17B6O14756 317 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 OR2F2O95006 317 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 OR2F1Q13607 317 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 TOR2AQ5JU69 321 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 LGI3Q8N145 548 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 TMEM229BQ8NBD8 167 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 CMBLQ96DG6 245 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 ARV1Q9H2C2 271 aa12.22□□□□□ -0.45
CIITA-213ENST00000618327 CYTIPO60759 359 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 GSK3AP49840 483 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 SMIM21Q3B7S5 101 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 TMEM211Q6ICI0 200 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 NLRC3Q7RTR2 1065 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 C1orf87Q8N0U7 546 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 SFT2D1Q8WV19 159 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 SEH1LQ96EE3 360 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 ARHGAP5-AS1Q96IT6 56 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 ABHD1Q96SE0 405 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 C12orf57Q99622 126 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 A0A0A6YYJ9 748 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 PPP5D1E7EU14 171 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 CCSO14618 274 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 HPNP05981 417 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 DUSP1P28562 367 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 SNRPNP63162 240 aaKnown RBP12.21□□□□□ -0.45
CIITA-213ENST00000618327 EXOSC2Q13868 293 aaKnown RBP12.21□□□□□ -0.45
CIITA-213ENST00000618327 OR4S1Q8NGB4 309 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 ZNF519Q8TB69 540 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 ZNF75AQ96N20 296 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 TAF9BQ9HBM6 251 aa12.21□□□□□ -0.45
CIITA-213ENST00000618327 LOC102723996A0A087X1L8 192 aa12.21□□□□□ -0.46
CIITA-213ENST00000618327 NFYBP25208 207 aa12.21□□□□□ -0.46
CIITA-213ENST00000618327 HIKESHIQ53FT3 197 aa12.21□□□□□ -0.46
CIITA-213ENST00000618327 TIPARPQ7Z3E1 657 aaKnown RBP12.21□□□□□ -0.46
CIITA-213ENST00000618327 TRMT61AQ96FX7 289 aaKnown RBP12.21□□□□□ -0.46
CIITA-213ENST00000618327 MTFP1Q9UDX5 166 aa12.21□□□□□ -0.46
CIITA-213ENST00000618327 SCO1O75880 301 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 HIST1H1DP16402 221 aaKnown RBP12.2□□□□□ -0.46
CIITA-213ENST00000618327 FCGR2CP31995 323 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 SNCAP37840 140 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 LINC00303Q3SY05 128 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 OR2Z1Q8NG97 314 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 AMELYQ99218 206 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 PTDSS2Q9BVG9 487 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 C9orf172C9J069 976 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 AKR7A2O43488 359 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 SPRY3O43610 288 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 ADAM11O75078 769 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 PDZD11Q5EBL8 140 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 Q8IYB0 196 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 DMBX1Q8NFW5 382 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 EXTL1Q92935 676 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 C10orf35Q96D05 121 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 ZNF426Q9BUY5 554 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 NUDT19A8MXV4 375 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 TRAF3IP2O43734 574 aaPredicted RBP12.2□□□□□ -0.46
CIITA-213ENST00000618327 CD1AP06126 327 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 SPNP16150 400 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 PI3P19957 117 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 OR2B8PP59922 312 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms