RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 PDCD1Q15116 288 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 NSUN5P2Q63ZY6 315 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2A2Q6IF42 318 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 BRICD5Q6PL45 260 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR5L1Q8NGL2 311 aa14.91□□□□□ -0.02
PCDHGC3-205ENST00000617641 SVILO95425 2214 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 IGKV1D-8A0A087WSZ0 117 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 SDCBPO00560 298 aaPredicted RBP14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2A4O95047 310 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 HAAOP46952 286 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 H2BFSP57053 126 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 DHRS2Q13268 280 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 PLEKHN1Q494U1 663 aaPredicted RBP14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 RTL6Q6ICC9 239 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2T2Q6IF00 324 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 RPUSD3Q6P087 351 aaKnown RBP14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 SLC25A42Q86VD7 318 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 FTMTQ8N4E7 242 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR10AD1Q8NGE0 317 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 MARCH1Q8TCQ1 289 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 SLAMF9Q96A28 289 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 OR2A7Q96R45 310 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 SULT4A1Q9BR01 284 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 SLA2Q9H6Q3 261 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 AK3Q9UIJ7 227 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 HSF4Q9ULV5 492 aa14.9□□□□□ -0.02
PCDHGC3-205ENST00000617641 CUL9Q8IWT3 2517 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF732B4DXR9 585 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 H3BUI4 141 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 GSTT2P0CG29 244 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 COX5AP20674 150 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR3A3P47888 321 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 RBM11P57052 281 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 TSPAN5P62079 268 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 PPA1Q15181 289 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 SEM1Q6ZVN7 128 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 ARRDC1Q8N5I2 433 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZSCAN4Q8NAM6 433 aaPredicted RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 ADAD2Q8NCV1 583 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 TERB2Q8NHR7 220 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 DYRK2Q92630 601 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 MRPS24Q96EL2 167 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 CCDC120Q96HB5 630 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 C1QTNF6Q9BXI9 259 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 CNOT4O95628 575 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 HLA-AP01891 365 aaKnown RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF35P13682 527 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 PER3P56645 1201 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 TAS2R46P59540 309 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 DCAF12L2Q5VW00 463 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 CCDC36Q8IYA8 594 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 C12orf45Q8N5I9 185 aaPredicted RBP14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 SCNM1Q9BWG6 230 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 CDH20Q9HBT6 801 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 CACNA1GO43497 2377 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 GTF3C1Q12789 2109 aa14.89□□□□□ -0.03
PCDHGC3-205ENST00000617641 ANKRD30BLA7E2S9 258 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 SMPD2O60906 423 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 TNFSF13O75888 250 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 BCL3P20749 454 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 NPY4RP50391 375 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 RAP2BP61225 183 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 PPP1R1AQ13522 171 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR13G1Q8NGZ3 307 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 OPN3Q9H1Y3 402 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 PCDHB16Q9NRJ7 776 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 PLSCR4Q9NRQ2 329 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 EHFQ9NZC4 300 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 SLC22A5O76082 557 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 AGFG2O95081 481 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 DAZAP2Q15038 168 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 CHRFAM7AQ494W8 412 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 C11orf88Q6PI97 169 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 INO80CQ6PI98 192 aaPredicted RBP14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF610Q8N9Z0 462 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR5AP2Q8NGF4 316 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR5A2Q8NGI9 324 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR5P3Q8WZ94 311 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 HIST1H2AAQ96QV6 131 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 GON7Q9BXV9 100 aa14.88□□□□□ -0.03
PCDHGC3-205ENST00000617641 F8VVB4 439 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 F8VWA3 439 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 AKR1C4P17516 323 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZBTB25P24278 435 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 EIF2S3P41091 472 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 ERVS71-1P61550 626 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 PPP1CBP62140 327 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 MRPL49Q13405 166 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 IGFBP7Q16270 282 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 SLC7A5P1Q8MH63 180 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 WDR31Q8NA23 367 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 STARD4Q96DR4 205 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 GPR137Q96N19 417 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 HS3ST6Q96QI5 342 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 CMSS1Q9BQ75 279 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 FBXO9Q9UK97 447 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 MBD3L4A6NDZ8 208 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 MBD3L3A6NE82 208 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 MBD3L5A6NJ08 208 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 TSC22D2O75157 780 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 238 ms