RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ATPAF1Q5TC12 328 aaPredicted RBP15.58■□□□□ 0.08
CDX1-202ENST00000616154 DUX4L9Q6RFH8 374 aaPredicted RBP15.58■□□□□ 0.08
CDX1-202ENST00000616154 METAP1DQ6UB28 335 aaPredicted RBP15.58■□□□□ 0.08
CDX1-202ENST00000616154 PRSS48Q7RTY5 328 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 SLC36A1Q7Z2H8 476 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 PDZD9Q8IXQ8 264 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 ZDHHC23Q8IYP9 409 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 ELMOD2Q8IZ81 293 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 OR51E1Q8TCB6 317 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 GPR84Q9NQS5 396 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 DUX4Q9UBX2 424 aa15.58■□□□□ 0.08
CDX1-202ENST00000616154 A0A1W2PQL4 384 aaPredicted RBP15.57■□□□□ 0.08
CDX1-202ENST00000616154 TRIM64CA6NLI5 447 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 DHRS7CA6NNS2 312 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 GPR37O15354 613 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 DHRS3O75911 302 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 C21orf33P30042 268 aaPredicted RBP15.57■□□□□ 0.08
CDX1-202ENST00000616154 PROK1P58294 105 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 CEACAM21Q3KPI0 293 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 TMEM42Q69YG0 159 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 GDPGP1Q6ZNW5 385 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 SSX6Q7RTT6 188 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 FAM216BQ8N7L0 139 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 PIGCQ92535 297 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 DNTTIP1Q9H147 329 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 DPAGT1Q9H3H5 408 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 ERVK13-1Q9NX77 482 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 ONECUT1Q9UBC0 465 aa15.57■□□□□ 0.08
CDX1-202ENST00000616154 EXOSC1Q9Y3B2 195 aaKnown RBP15.57■□□□□ 0.08
CDX1-202ENST00000616154 LOC110117498-PIK3R3F6TDL0 507 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 RGS10O43665 173 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 SULT1C4O75897 302 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 CCL1P22362 96 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 GNG3P63215 75 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 RIPPLY1Q0D2K3 151 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 GALEQ14376 348 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 STUMQ69YW2 141 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 ASPHD2Q6ICH7 369 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 ZNF773Q6PK81 442 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 CMTM4Q8IZR5 234 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 STX19Q8N4C7 294 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 ZSCAN4Q8NAM6 433 aaPredicted RBP15.56■□□□□ 0.08
CDX1-202ENST00000616154 ZNF485Q8NCK3 441 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 OR10H4Q8NGA5 316 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 OR5A2Q8NGI9 324 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 NPRL2Q8WTW4 380 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 RNF170Q96K19 258 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 TTTY10Q9BZA0 68 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 OR51I2Q9H344 312 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 CAB39Q9Y376 341 aaPredicted RBP15.56■□□□□ 0.08
CDX1-202ENST00000616154 FAM96BQ9Y3D0 163 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 SNX5Q9Y5X3 404 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 V9GYS6 101 aa15.56■□□□□ 0.08
CDX1-202ENST00000616154 A0A1B0GTI1 187 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 OR5B21A6NL26 309 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 NDUFB3O43676 98 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 MTRF1O75570 445 aaKnown RBP15.55■□□□□ 0.08
CDX1-202ENST00000616154 MT-ND2P03891 347 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 FBP1P09467 338 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 AMY2BP19961 511 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 TGM4P49221 684 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 ETV1P50549 477 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 TAF9Q16594 264 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 C8orf46Q8TAG6 207 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 PPP1R14AQ96A00 147 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 SEH1LQ96EE3 360 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 DCTN5Q9BTE1 182 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 ZNRD1Q9P1U0 126 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 OR52A1Q9UKL2 312 aa15.55■□□□□ 0.08
CDX1-202ENST00000616154 DAPL1A0PJW8 107 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 MAGEB4O15481 346 aaPredicted RBP15.54■□□□□ 0.08
CDX1-202ENST00000616154 KRT8P05787 483 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 GUCA2AQ02747 115 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 IKZF1Q13422 519 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 LRRC10Q5BKY1 277 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 BCL2L15Q5TBC7 163 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 Q6ZSV7 163 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 SYS1Q8N2H4 156 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 OR52N1Q8NH53 320 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 RPL3LQ92901 407 aaKnown RBP15.54■□□□□ 0.08
CDX1-202ENST00000616154 HIST1H2AAQ96QV6 131 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 C16orf95Q9H693 158 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 SIRT7Q9NRC8 400 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 CLEC2DQ9UHP7 191 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 ENPP5Q9UJA9 477 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 VPREB3Q9UKI3 123 aa15.54■□□□□ 0.08
CDX1-202ENST00000616154 RNASEK-C17orf49H0YIS7 233 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 FAHP16930 419 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 MYL12AP19105 171 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 EEF1B2P24534 225 aaKnown RBP15.53■□□□□ 0.08
CDX1-202ENST00000616154 GPM6AP51674 278 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 ACTA2P62736 377 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 ACTG2P63267 376 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 TBCEQ15813 527 aaPredicted RBP15.53■□□□□ 0.08
CDX1-202ENST00000616154 DHRS7BQ6IAN0 325 aaPredicted RBP15.53■□□□□ 0.08
CDX1-202ENST00000616154 LHFPL3Q86UP9 236 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 CATSPERDQ86XM0 798 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 SPARTQ8N0X7 666 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 Q8N7P7 452 aa15.53■□□□□ 0.08
CDX1-202ENST00000616154 NANOGP1Q8N7R0 232 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms