RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 STK11Q15831 433 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 LYRM7Q5U5X0 104 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 RPL7L1Q6DKI1 246 aaKnown RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PRSS54Q6PEW0 395 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF574Q6ZN55 896 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM213BQ8TBF2 198 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PHYHIPLQ96FC7 376 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 MS4A7Q9GZW8 240 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PLEKHA2Q9HB19 425 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 TCFL5Q9UL49 500 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PATJQ8NI35 1801 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR6C6A6NF89 314 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 KLRC4-KLRK1H3BQV0 150 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 EFNA2O43921 213 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 CDC14BO60729 498 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 CNOT4O95628 575 aaKnown RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 FPR2P25090 351 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 MPLP40238 635 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 ARG2P78540 354 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 PJVKQ0ZLH3 352 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 C2orf68Q2NKX9 166 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMEM268Q5VZI3 342 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 C6orf15Q6UXA7 325 aaPredicted RBP4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 CNEP1R1Q8N9A8 125 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 LINC00052Q96N35 136 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 KCNIP1Q9NZI2 227 aa4.96□□□□□ -1.62
SYNCRIP-204ENST00000616122 C1orf196B1AJZ1 125 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CLPPQ16740 277 aaPredicted RBP4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 AKR1C8PQ5T2L2 129 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 TSPO2Q5TGU0 170 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 TFAP2EQ6VUC0 442 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 OSR2Q8N2R0 312 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 DEFB123Q8N688 67 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 RPS4Y2Q8TD47 263 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 GLYATL2Q8WU03 294 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 NANOS1Q8WY41 292 aaKnown RBP4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CPNE4Q96A23 557 aaPredicted RBP4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PIK3IP1Q96FE7 263 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CXorf58Q96LI9 332 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 MAGT1Q9H0U3 335 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 RAB18Q9NP72 206 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 KCNS2Q9ULS6 477 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ACANP16112 2415 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 H3BP45 60 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 GPR137BO60478 399 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PRF1P14222 555 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 APLNRP35414 380 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 STARD6P59095 220 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 UNC119Q13432 240 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 GPR157Q5UAW9 335 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 TMEM217Q8N7C4 229 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 NFAM1Q8NET5 270 aaPredicted RBP4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SCGB1C1Q8TD33 95 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 HAS2Q92819 552 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 EXTL1Q92935 676 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 HINT2Q9BX68 163 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM206AQ9NX38 181 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PRR13Q9NZ81 148 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF391Q9UJN7 358 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 TNFSF18Q9UNG2 199 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 GPR31O00270 319 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SFT2D2O95562 160 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CD74P04233 296 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 LIFP15018 202 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PDZK1IP1Q13113 114 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM209AQ5JX71 171 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 VAX1Q5SQQ9 334 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 FAM166AQ6J272 317 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLC25A47Q6Q0C1 308 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF441Q8N8Z8 693 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 BVESQ8NE79 360 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF524Q96C55 264 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 MS4A3Q96HJ5 214 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SF3B5Q9BWJ5 86 aaKnown RBP4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SUCNR1Q9BXA5 334 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 TAF9BQ9HBM6 251 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PLA2G3Q9NZ20 509 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PRUNE2Q8WUY3 3088 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CD300LBA8K4G0 201 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 IFNA2P01563 188 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ZNF14P17017 642 aaPredicted RBP4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 EPHA1P21709 976 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ECI1P42126 302 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 F2RL1P55085 397 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 NHLRC3Q5JS37 347 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 KRBOX4Q5JUW0 171 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 RIPPLY2Q5TAB7 128 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLC38A6Q8IZM9 456 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 OR10S1Q8NGN2 331 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 UBALD1Q8TB05 177 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 ABHD3Q8WU67 409 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 SLAMF9Q96A28 289 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 RPS10P5Q9NQ39 176 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 PLSCR2Q9NRY7 297 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 NECAP2Q9NVZ3 263 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 KLK13Q9UKR3 277 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CCDC187A0A096LP49 1063 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 TAAR5O14804 337 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 CST7O76096 145 aa4.95□□□□□ -1.62
SYNCRIP-204ENST00000616122 MELTFP08582 738 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms