RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 CALHM3Q86XJ0 350 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 NEURL1O76050 574 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 FOXL2P58012 376 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 HGDQ93099 445 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 FAM60AQ9NP50 221 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 EPXP11678 715 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 ZNF586Q9NXT0 402 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 PRR13Q9NZ81 148 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 MAST2Q6P0Q8 1798 aa16.63■□□□□ 0.25
GABPB1-212ENST00000615671 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
GABPB1-212ENST00000615671 ACTL6AO96019 429 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 HLXQ14774 488 aaPredicted RBP16.62■□□□□ 0.25
GABPB1-212ENST00000615671 HIKESHIQ53FT3 197 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 COMMD1Q8N668 190 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 OR4A4PQ8NGN8 299 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 WDR61Q9GZS3 305 aaKnown RBP16.62■□□□□ 0.25
GABPB1-212ENST00000615671 SAP30LQ9HAJ7 183 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 TRBV23-1A0A0A0MS06 115 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 LINC01387J3KSC0 135 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 BMPR1BO00238 502 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 BTG1P62324 171 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 Q8IYB0 196 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 DNAJB12Q9NXW2 375 aaKnown RBP16.62■□□□□ 0.25
GABPB1-212ENST00000615671 FOXJ3Q9UPW0 622 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 A0A1W2PNV4 684 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 PYCARD-AS1I3L0S3 204 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 FGF2P09038 288 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 BCL3P20749 454 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 ETFDHQ16134 617 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 PLEKHA2Q9HB19 425 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 MRPS18BQ9Y676 258 aaKnown RBP16.62■□□□□ 0.25
GABPB1-212ENST00000615671 HAX1O00165 279 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 NQO2P16083 231 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 NKG7Q16617 165 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 FAHD2BQ6P2I3 314 aaPredicted RBP16.62■□□□□ 0.25
GABPB1-212ENST00000615671 RBPMS2Q6ZRY4 209 aaKnown RBP16.62■□□□□ 0.25
GABPB1-212ENST00000615671 FAHD2AQ96GK7 314 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 RNF2Q99496 336 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 CHRDL1Q9BU40 450 aa16.62■□□□□ 0.25
GABPB1-212ENST00000615671 KLK8O60259 260 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 FZD6O60353 706 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 DHRS3O75911 302 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 CD37P11049 281 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 OR52L2PQ8NGH6 319 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 OR5D13Q8NGL4 314 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 FUCA1P04066 466 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 MGPP08493 103 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 TRAPPC2P0DI81 140 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 TRAPPC2BP0DI82 140 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 DYNC2LI1Q8TCX1 351 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 NIT2Q9NQR4 276 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 RABAC1Q9UI14 185 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 A0A0B4J2E0 115 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 A0A1B0GX12 115 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 CISD3P0C7P0 127 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 DDOSTP39656 456 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 OR4D10Q8NGI6 311 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 KCNMB2Q9Y691 235 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 SP1P08047 785 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 G6PCP35575 357 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 CEACAM3P40198 252 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 GPBAR1Q8TDU6 330 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 TMUB1Q9BVT8 246 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 PTGFRP43088 359 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 TIPARPQ7Z3E1 657 aaKnown RBP16.61■□□□□ 0.25
GABPB1-212ENST00000615671 ZNF485Q8NCK3 441 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 MRGPRX3Q96LB0 322 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 CDCA4Q9BXL8 241 aa16.61■□□□□ 0.25
GABPB1-212ENST00000615671 TIAL1Q01085 375 aaKnown RBP eCLIP16.6■□□□□ 0.25
GABPB1-212ENST00000615671 SLC38A11Q08AI6 406 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 SLC16A12Q6ZSM3 486 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 PP6455Q8WZ26 134 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 TRAPPC1Q9Y5R8 145 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 C3orf85A0A1B0GTC6 90 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 SERPINE3A8MV23 424 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 TFPI2P48307 235 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 GGTLC2Q14390 218 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 VAMP3Q15836 100 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 PNLIPP16233 465 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 NPY1RP25929 384 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 NOL4LQ96MY1 436 aaPredicted RBP16.6■□□□□ 0.25
GABPB1-212ENST00000615671 CACNG5Q9UF02 275 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 ETFRF1Q6IPR1 90 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 TMEM229BQ8NBD8 167 aa16.6■□□□□ 0.25
GABPB1-212ENST00000615671 ZNF768Q9H5H4 540 aaKnown RBP16.6■□□□□ 0.25
GABPB1-212ENST00000615671 ANKRD34CP0C6C1 535 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 SMIM18P0DKX4 95 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 CBLN3Q6UW01 205 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 OR5R1Q8NH85 324 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 ZG16BQ96DA0 208 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 UQCC1Q9NVA1 299 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 TRAV38-1A0A0B4J264 116 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 LIMS3P0CW19 117 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 LIMS4P0CW20 117 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 USF1P22415 310 aaPredicted RBP16.59■□□□□ 0.25
GABPB1-212ENST00000615671 REG1BP48304 166 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 PNLIPRP3Q17RR3 467 aa16.59■□□□□ 0.25
GABPB1-212ENST00000615671 ZNF707Q96C28 371 aaPredicted RBP16.59■□□□□ 0.25
GABPB1-212ENST00000615671 FLYWCH2Q96CP2 140 aaKnown RBP16.59■□□□□ 0.25
GABPB1-212ENST00000615671 COLQQ9Y215 455 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms