RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 TRIM36Q9NQ86 728 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 ONECUT1Q9UBC0 465 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 RPUSD1Q9UJJ7 312 aaKnown RBP4.68□□□□□ -1.66
CPNE3-208ENST00000614678 TRBV2A0A0J9YWF9 115 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM82A0PJX8 343 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 A8MXK9 166 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 PIN1P1O15428 100 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 PGA5P0DJD9 388 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 AZGP1P25311 298 aaKnown RBP4.68□□□□□ -1.66
CPNE3-208ENST00000614678 RAB13P51153 203 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 HCP5Q6MZN7 132 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 IZUMO2Q6UXV1 221 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 DOK3Q7L591 496 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 VMO1Q7Z5L0 202 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM203Q969S6 136 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 OR14A2Q96R54 314 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 NRIP2Q9BQI9 281 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 CHST5Q9GZS9 411 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 C14orf119Q9NWQ9 140 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 MIOXQ9UGB7 285 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 TRAV38-1A0A0B4J264 116 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 A0A0U1RQK1 487 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 FOXH1O75593 365 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 APOC1P02654 83 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 CFHR2P36980 270 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 OR3A4PP47883 348 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 TGM4P49221 684 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 ERVK11-1P61568 191 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 RELBQ01201 579 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 COL10A1Q03692 680 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 SCN1BQ07699 218 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 RAB40BQ12829 278 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 PLA1AQ53H76 456 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 Q6ZSR3 168 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 C1orf87Q8N0U7 546 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 DYNAPQ8N1N2 210 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 BPIFB2Q8N4F0 458 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 OR5A2Q8NGI9 324 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 GHSRQ92847 366 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 SIRPDQ9H106 197 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 DCLRE1BQ9H816 532 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM160Q9NX00 188 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 NOTCH3Q9UM47 2321 aa4.68□□□□□ -1.66
CPNE3-208ENST00000614678 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 FADS2O95864 444 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 EDDM3AQ14507 147 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PIGYQ3MUY2 71 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 MEDAGQ5VYS4 303 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 C17orf107Q6ZR85 190 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 FAM220AQ7Z4H9 259 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 LHFPL4Q7Z7J7 247 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 FBLIM1Q8WUP2 373 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 TNFRSF14Q92956 283 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 AJUBAQ96IF1 538 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 CNBD2Q96M20 576 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 HIST1H2AAQ96QV6 131 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 NR1H4Q96RI1 486 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 MRPS18AQ9NVS2 196 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SLC25A10Q9UBX3 287 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 OR5V1Q9UGF6 321 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ENOPH1Q9UHY7 261 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PSORS1C1Q9UIG5 152 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 GSTK1Q9Y2Q3 226 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 MEGF8Q7Z7M0 2845 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PPIAL4CA0A0B4J2A2 164 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SIRPB1O00241 398 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 TOX4O94842 621 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 NXPH2O95156 264 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ATP6V1G2O95670 118 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PPIAL4GP0DN37 164 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PRDX2P32119 198 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 GDNFP39905 211 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 MTCP1P56278 107 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ARMCX4Q5H9R4 360 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 KRT74Q7RTS7 529 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SATL1Q86VE3 508 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 MKXQ8IYA7 352 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 OR4S1Q8NGB4 309 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 OR5AK2Q8NH90 309 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 NANPQ8TBE9 248 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 DYRK2Q92630 601 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 TMIGD2Q96BF3 282 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 RDH12Q96NR8 316 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 WDFY2Q96P53 400 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SLC22A4Q9H015 551 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 FGF20Q9NP95 211 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 LRCH1Q9Y2L9 728 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 RPL36Q9Y3U8 105 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SMIM30A4D0T7 59 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 DNAJC9-AS1A6NH13 148 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 SLC1A7O00341 560 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 PHYHO14832 338 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 HOXA3O43365 443 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 CELP19835 753 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 CDK5R1Q15078 307 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM200BQ69YZ2 307 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 C8orf59Q8N0T1 100 aaPredicted RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ASCC1Q8N9N2 400 aaKnown RBP4.67□□□□□ -1.66
CPNE3-208ENST00000614678 POC1AQ8NBT0 407 aa4.67□□□□□ -1.66
CPNE3-208ENST00000614678 ITFG2Q969R8 447 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms