RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 LINC00482Q8N8I6 264 aa18.71■□□□□ 0.59
MMP28-203ENST00000612672 GPR173Q9NS66 373 aa18.71■□□□□ 0.59
MMP28-203ENST00000612672 TSSC4Q9Y5U2 329 aaPredicted RBP18.71■□□□□ 0.59
MMP28-203ENST00000612672 RIPPLY1Q0D2K3 151 aa18.7■□□□□ 0.58
MMP28-203ENST00000612672 TEX47Q8TBZ9 253 aa18.7■□□□□ 0.58
MMP28-203ENST00000612672 TTTY10Q9BZA0 68 aa18.7■□□□□ 0.58
MMP28-203ENST00000612672 PBOV1Q9GZY1 135 aa18.7■□□□□ 0.58
MMP28-203ENST00000612672 SAMHD1Q9Y3Z3 626 aaKnown RBP18.7■□□□□ 0.58
MMP28-203ENST00000612672 DNAH1Q9P2D7 4330 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 PQLC2LA1A4F0 135 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 NRASP01111 189 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 RBP4P02753 201 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 SLC2A5P22732 501 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 ERVK11-1P61568 191 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 ACTA2P62736 377 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 ACTG2P63267 376 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 ACTC1P68032 377 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 ACTA1P68133 377 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 BAIAP2L2Q6UXY1 529 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 CD300LDQ6UXZ3 194 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 KRT77Q7Z794 578 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 COMMD2Q86X83 199 aa18.69■□□□□ 0.58
MMP28-203ENST00000612672 ASCC1Q8N9N2 400 aaKnown RBP18.69■□□□□ 0.58
MMP28-203ENST00000612672 TMEM269A0A1B0GVZ9 245 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 A6NIN4 97 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 PRR23D1E9PI22 279 aaPredicted RBP18.68■□□□□ 0.58
MMP28-203ENST00000612672 MMP23AO75900 390 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 AMY1AP04745 511 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 AMY2AP04746 511 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 ALDOBP05062 364 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 PRR23D2P0DMB1 279 aaPredicted RBP18.68■□□□□ 0.58
MMP28-203ENST00000612672 MPZP25189 248 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 EDDM3BP56851 147 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 OR12D2P58182 307 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 ZNF684Q5T5D7 378 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 TMEM42Q69YG0 159 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 CENPVQ7Z7K6 275 aaPredicted RBP18.68■□□□□ 0.58
MMP28-203ENST00000612672 TPRX1Q8N7U7 411 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 OR10G2Q8NGC3 310 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 ELAC2Q9BQ52 826 aaKnown RBP18.68■□□□□ 0.58
MMP28-203ENST00000612672 ENPP5Q9UJA9 477 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 COPS3Q9UNS2 423 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 SLC22A13Q9Y226 551 aa18.68■□□□□ 0.58
MMP28-203ENST00000612672 IGHV2-26A0A0B4J1V2 119 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 TMEM82A0PJX8 343 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 H3BN98 237 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 LPLP06858 475 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 OR2T5Q6IEZ7 315 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 ASRGL1Q7L266 308 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 ANGPTL5Q86XS5 388 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 CPOQ8IVL8 374 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 OR4P4Q8NGL7 312 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 OR2T29Q8NH02 315 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 FEVQ99581 238 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 ZNF446Q9NWS9 450 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 LAMP5Q9UJQ1 280 aa18.67■□□□□ 0.58
MMP28-203ENST00000612672 TTRP02766 147 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 MRPL3P09001 348 aaKnown RBP18.66■□□□□ 0.58
MMP28-203ENST00000612672 CCDC159P0C7I6 412 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 ATP6V1B1P15313 513 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 ABCA11PQ4W5N1 156 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 MINOS1Q5TGZ0 78 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 C18orf65Q6ZTR6 163 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 ZNF573Q86YE8 665 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 MRPL41Q8IXM3 137 aaKnown RBP18.66■□□□□ 0.58
MMP28-203ENST00000612672 NDNFQ8TB73 568 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 ZNF714Q96N38 554 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 REEP1Q9H902 201 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 ARL8BQ9NVJ2 186 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 IL36RNQ9UBH0 155 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 NUFIP1Q9UHK0 495 aaKnown RBP18.66■□□□□ 0.58
MMP28-203ENST00000612672 MINOS1-NBL1R4GNA1 71 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 TENM2Q9NT68 2774 aa18.66■□□□□ 0.58
MMP28-203ENST00000612672 KIAA2026Q5HYC2 2103 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 GSC2O15499 205 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 PRODHO43272 600 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 SRSF10O75494 262 aaKnown RBP18.65■□□□□ 0.58
MMP28-203ENST00000612672 DHRS3O75911 302 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 DUS4LO95620 317 aaKnown RBP18.65■□□□□ 0.58
MMP28-203ENST00000612672 AZGP1P25311 298 aaKnown RBP18.65■□□□□ 0.58
MMP28-203ENST00000612672 GINS1Q14691 196 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 KHDC1LQ5JSQ8 128 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 TMEM179BQ7Z7N9 219 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 DEFB107AQ8IZN7 70 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 BCAS4Q8TDM0 211 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 ARGLU1Q9NWB6 273 aaPredicted RBP18.65■□□□□ 0.58
MMP28-203ENST00000612672 POLDIP2Q9Y2S7 368 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 SESN1Q9Y6P5 492 aa18.65■□□□□ 0.58
MMP28-203ENST00000612672 ACOD1A6NK06 481 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 EDDM3AQ14507 147 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 CLVS2Q5SYC1 327 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 ZNF676Q8N7Q3 588 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 ACTR3BQ9P1U1 418 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 V9GYS6 101 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 STARD9Q9P2P6 4700 aa18.64■□□□□ 0.57
MMP28-203ENST00000612672 A0A1B0GTI1 187 aa18.63■□□□□ 0.57
MMP28-203ENST00000612672 CCDC182A6NF36 153 aa18.63■□□□□ 0.57
MMP28-203ENST00000612672 E9PQ18 207 aa18.63■□□□□ 0.57
MMP28-203ENST00000612672 MAGEB4O15481 346 aaPredicted RBP18.63■□□□□ 0.57
MMP28-203ENST00000612672 IGHA1P01876 353 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms