RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 A0A0G2JK05 382 aa11□□□□□ -0.65
CDH1-212ENST00000611625 PPP5D1E7EU14 171 aa11□□□□□ -0.65
CDH1-212ENST00000611625 SH2D1BO14796 132 aa11□□□□□ -0.65
CDH1-212ENST00000611625 TTRP02766 147 aa11□□□□□ -0.65
CDH1-212ENST00000611625 SLC25A4P12235 298 aa11□□□□□ -0.65
CDH1-212ENST00000611625 EDDM3BP56851 147 aa11□□□□□ -0.65
CDH1-212ENST00000611625 TMEM41BQ5BJD5 291 aa11□□□□□ -0.65
CDH1-212ENST00000611625 TMEM65Q6PI78 240 aa11□□□□□ -0.65
CDH1-212ENST00000611625 SCARF2Q96GP6 870 aaPredicted RBP11□□□□□ -0.65
CDH1-212ENST00000611625 MENTQ9BUN1 341 aa11□□□□□ -0.65
CDH1-212ENST00000611625 LOXL2Q9Y4K0 774 aa11□□□□□ -0.65
CDH1-212ENST00000611625 ARGFXA6NJG6 315 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 TERTO14746 1132 aaKnown RBP10.99□□□□□ -0.65
CDH1-212ENST00000611625 CYB5BO43169 146 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 ONECUT2O95948 504 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 PNPP00491 289 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 RNF212Q495C1 297 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 PSENENQ9NZ42 101 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 KLF13Q9Y2Y9 288 aaPredicted RBP10.99□□□□□ -0.65
CDH1-212ENST00000611625 AHCTF1Q8WYP5 2266 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 DICER1Q9UPY3 1922 aaKnown RBP10.99□□□□□ -0.65
CDH1-212ENST00000611625 IGKV1D-42A0A075B6H8 117 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 KCNJ3P48549 501 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 PRSS12P56730 875 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 SMUG1Q53HV7 270 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 ADAM19Q9H013 955 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 OR2M5A3KFT3 312 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 RAB13P51153 203 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 IL11RAQ14626 422 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 ARTNQ5T4W7 220 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 ZNF660Q6AZW8 331 aaPredicted RBP10.99□□□□□ -0.65
CDH1-212ENST00000611625 CBLN2Q8IUK8 224 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 KCNIP2Q9NS61 270 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 UFSP2Q9NUQ7 469 aa10.99□□□□□ -0.65
CDH1-212ENST00000611625 AQP7P3A6NL99 342 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 ADAM10O14672 748 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 PATE4P0C8F1 98 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 LPAR3Q9UBY5 353 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 TO15178 435 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 SCGB1D1O95968 90 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 CTSBP07858 339 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 PGA3P0DJD8 388 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 NQO2P16083 231 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 ACKR3P25106 362 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 EPHA8P29322 1005 aaPredicted RBP10.98□□□□□ -0.65
CDH1-212ENST00000611625 IL13RA2Q14627 380 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 OVCH2Q7RTZ1 564 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 OR6S1Q8NH40 331 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 CABLES2Q9BTV7 478 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 DEFB127Q9H1M4 99 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 TOX3O15405 576 aaPredicted RBP10.98□□□□□ -0.65
CDH1-212ENST00000611625 SLC10A1Q14973 349 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 BATFQ16520 125 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 PRAMEF5Q5TYX0 476 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 OR2C3Q8N628 320 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 RPUSD4Q96CM3 377 aaKnown RBP10.98□□□□□ -0.65
CDH1-212ENST00000611625 IGLV1-36A0A0B4J1U3 117 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 TSPAN2O60636 221 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 PABPC1L2AQ5JQF8 200 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.98□□□□□ -0.65
CDH1-212ENST00000611625 OR10P1Q8NGE3 313 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 TVP23CQ96ET8 276 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 SMIM7Q9BQ49 75 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 PATZ1Q9HBE1 687 aaKnown RBP10.98□□□□□ -0.65
CDH1-212ENST00000611625 POMT1Q9Y6A1 747 aa10.98□□□□□ -0.65
CDH1-212ENST00000611625 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 OR8U8P0C7N1 319 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 FAM157BP0CG42 384 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 MOGAT2Q3SYC2 334 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 SLC35B3Q9H1N7 401 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 ADAM20O43506 726 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 SELEP16581 610 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 H2BFSP57053 126 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 SNRPEP62304 92 aaKnown RBP10.97□□□□□ -0.65
CDH1-212ENST00000611625 LAMTOR1Q6IAA8 161 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 WDR74Q6RFH5 385 aaPredicted RBP10.97□□□□□ -0.65
CDH1-212ENST00000611625 KCNK7Q9Y2U2 307 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 C3orf85A0A1B0GTC6 90 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 MED19A0JLT2 244 aaPredicted RBP10.97□□□□□ -0.65
CDH1-212ENST00000611625 TGOLN2O43493 480 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 ZP4Q12836 540 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 NR2C2APQ86WQ0 139 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 OR5C1Q8NGR4 320 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 MRPL22Q9NWU5 206 aaKnown RBP10.97□□□□□ -0.65
CDH1-212ENST00000611625 WSB1Q9Y6I7 421 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 TDRD6O60522 2096 aaKnown RBP10.97□□□□□ -0.65
CDH1-212ENST00000611625 IL11P20809 199 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 TSPO2Q5TGU0 170 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 SLC39A7Q92504 469 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 MARVELD3Q96A59 401 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 MRPS24Q96EL2 167 aaKnown RBP10.97□□□□□ -0.65
CDH1-212ENST00000611625 WDR13Q9H1Z4 485 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 OPA3Q9H6K4 179 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 TMEM74BQ9NUR3 256 aa10.97□□□□□ -0.65
CDH1-212ENST00000611625 SRD5A2P31213 254 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 FOXL2P58012 376 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 RPS4XP62701 263 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms