RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 SPTSSAQ969W0 71 aa18.17■□□□□ 0.5
CBWD3-207ENST00000611426 TMEM246Q9BRR3 403 aa18.17■□□□□ 0.5
CBWD3-207ENST00000611426 C6orf62Q9GZU0 229 aaPredicted RBP18.17■□□□□ 0.5
CBWD3-207ENST00000611426 PLGRKTQ9HBL7 147 aa18.17■□□□□ 0.5
CBWD3-207ENST00000611426 PALMDQ9NP74 551 aa18.17■□□□□ 0.5
CBWD3-207ENST00000611426 TTRP02766 147 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 SRMP19623 302 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 FSTP19883 344 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 CCL1P22362 96 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 HSD11B1P28845 292 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 S100A5P33763 92 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 PMELP40967 661 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 MAB21L1Q13394 359 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 DCTN2Q13561 401 aaKnown RBP18.16■□□□□ 0.5
CBWD3-207ENST00000611426 ZNF846Q147U1 533 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 TAF13Q15543 124 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 CEP78Q5JTW2 689 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 FAM201AQ5SY85 155 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 DOK3Q7L591 496 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 BCL6BQ8N143 479 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-207ENST00000611426 OR10AC1Q8NH08 325 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 NEIL1Q96FI4 390 aaPredicted RBP18.16■□□□□ 0.5
CBWD3-207ENST00000611426 PBOV1Q9GZY1 135 aa18.16■□□□□ 0.5
CBWD3-207ENST00000611426 DOCK11Q5JSL3 2073 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 NOTOA8MTQ0 251 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 M0R135 149 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 PDCD5O14737 125 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 FSTL3O95633 263 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 IGLV3-1P01715 115 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 RAB3BP20337 219 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 GATA4P43694 442 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 AWAT1Q58HT5 328 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 Q6ZSR3 168 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 NLRC3Q7RTR2 1065 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 MRPL21Q7Z2W9 205 aaKnown RBP18.15■□□□□ 0.5
CBWD3-207ENST00000611426 CCDC190Q86UF4 302 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 CELF2-AS1Q8N7Q2 184 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 OR11L1Q8NGX0 322 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 BORCS5Q969J3 196 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 ERGIC1Q969X5 290 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 TMEM106AQ96A25 262 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 ZNF799Q96GE5 643 aa18.15■□□□□ 0.5
CBWD3-207ENST00000611426 MS4A7Q9GZW8 240 aaPredicted RBP18.15■□□□□ 0.5
CBWD3-207ENST00000611426 LOC107986453A0A1B0GWG9 222 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 CD2P06729 351 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 CD37P11049 281 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 ZNF121P58317 390 aaPredicted RBP18.14■□□□□ 0.49
CBWD3-207ENST00000611426 ZNF45Q02386 682 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 PAX2Q02962 417 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 TUSC1Q2TAM9 212 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 SFXN4Q6P4A7 337 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 DRAM2Q6UX65 266 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 RDH10Q8IZV5 341 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 CCDC54Q8NEL0 328 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 OR8B3Q8NGG8 313 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 OR51A4Q8NGJ6 313 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 RAB40AQ8WXH6 277 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 DUX5Q96PT3 197 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 OR8B2Q96RD0 313 aa18.14■□□□□ 0.49
CBWD3-207ENST00000611426 A0A0U1RQV5 110 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 CTDSP2O14595 271 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 PPIAL4GP0DN37 164 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 CA6P23280 308 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 PRTN3P24158 256 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 CD200P41217 278 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 CX3CR1P49238 355 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 BAMBIQ13145 260 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 OR8G1Q15617 311 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 DDI2Q5TDH0 399 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 Q8TCH9 128 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 PPP1R14AQ96A00 147 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 SLC22A4Q9H015 551 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 SLITRK2Q9H156 845 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 UFSP2Q9NUQ7 469 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 FOXJ3Q9UPW0 622 aa18.13■□□□□ 0.49
CBWD3-207ENST00000611426 IGHV2-70DA0A0C4DH43 119 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 A0A1B0GTI1 187 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 DNAJC9-AS1A6NH13 148 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 CD40LGP29965 261 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 PITPNBP48739 271 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 PSMD7P51665 324 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 PRKXP51817 358 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 SNAI3Q3KNW1 292 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 PRAMEF6Q5VXH4 476 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 MZT2AQ6P582 158 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 LRRTM1Q86UE6 522 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 PLPP7Q8NBV4 271 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 SGMS2Q8NHU3 365 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 TSEN15Q8WW01 171 aaKnown RBP18.12■□□□□ 0.49
CBWD3-207ENST00000611426 ZNF48Q96MX3 618 aaPredicted RBP18.12■□□□□ 0.49
CBWD3-207ENST00000611426 CLN8Q9UBY8 286 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 GTF2A1LQ9UNN4 478 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 DHDHQ9UQ10 334 aa18.12■□□□□ 0.49
CBWD3-207ENST00000611426 NOP16Q9Y3C1 178 aaKnown RBP18.12■□□□□ 0.49
CBWD3-207ENST00000611426 IGHV3OR16-10A0A075B7F0 116 aa18.11■□□□□ 0.49
CBWD3-207ENST00000611426 KIR2DS1A0A191URI9 304 aa18.11■□□□□ 0.49
CBWD3-207ENST00000611426 GGT3PA6NGU5 568 aa18.11■□□□□ 0.49
CBWD3-207ENST00000611426 CD300LBA8K4G0 201 aa18.11■□□□□ 0.49
CBWD3-207ENST00000611426 IGHV4-38-2P0DP08 117 aa18.11■□□□□ 0.49
CBWD3-207ENST00000611426 HKR1P10072 659 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms