RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 SYT3Q9BQG1 590 aa8.46□□□□□ -1.06
TPM1-233ENST00000610733 OCSTAMPQ9BR26 566 aa8.46□□□□□ -1.06
TPM1-233ENST00000610733 ZNF426Q9BUY5 554 aa8.46□□□□□ -1.06
TPM1-233ENST00000610733 NDRG3Q9UGV2 375 aa8.46□□□□□ -1.06
TPM1-233ENST00000610733 ALPK3Q96L96 1907 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 TRBV5-7A0A0A0MS05 114 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 C5orf63A6NC05 138 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 CXCL13O43927 109 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 HNF1AP20823 631 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 AFF3P51826 1226 aaKnown RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 DCAF7P61962 342 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 RUNX1Q01196 453 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 UBAC2Q8NBM4 344 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 SCARF2Q96GP6 870 aaPredicted RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 PRRX2Q99811 253 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 SH3BGRL3Q9H299 93 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 CRLF2Q9HC73 371 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 SLC34A2O95436 690 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 IGHV3-13P01766 116 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 IGHV3-7P01780 117 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 PTAFRP25105 342 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 GDF1P27539 372 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 PNLIPRP2P54317 469 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 RPL23AP62750 156 aaKnown RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 PLGLB1Q02325 96 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 ZNF260Q3ZCT1 412 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 WDSUB1Q8N9V3 476 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 ZNF721Q8TF20 911 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 LIPHQ8WWY8 451 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 ZNF385AQ96PM9 386 aaKnown RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 GABRG3Q99928 467 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 MFRPQ9BY79 579 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 OR51M1Q9H341 326 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 C5orf66Q9H5L9 145 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 AK3Q9UIJ7 227 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 WDR1O75083 606 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 SFT2D2O95562 160 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 BPNT1O95861 308 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 LINC00271P0C7V0 271 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 HLA-BQ31612 363 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 GUSBP11Q6P575 273 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 ZNF813Q6ZN06 617 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 LINC00696Q6ZRV3 163 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 AAED1Q7RTV5 226 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 CPNE4Q96A23 557 aaPredicted RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 C12orf49Q9H741 205 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 OBP2AQ9NY56 170 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 LPAR3Q9UBY5 353 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 MIOXQ9UGB7 285 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 MMACHCQ9Y4U1 282 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 TIMM8BQ9Y5J9 83 aaPredicted RBP8.45□□□□□ -1.06
TPM1-233ENST00000610733 ABCA4P78363 2273 aa8.45□□□□□ -1.06
TPM1-233ENST00000610733 ARHGAP21Q5T5U3 1957 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 PIEZO2Q9H5I5 2752 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 ZNF816-ZNF321PA0A0X1KG74 233 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 C7orf77A4D0Y5 90 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 GEMIN2O14893 280 aaKnown RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 IFNA5P01569 189 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 DCDP81605 110 aaKnown RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 TFAP2EQ6VUC0 442 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 PLPP5Q8NEB5 264 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 OR13G1Q8NGZ3 307 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 BSCL2Q96G97 398 aaPredicted RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 LPAR5Q9H1C0 372 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 SMOC1Q9H4F8 434 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 AURKAIP1Q9NWT8 199 aaPredicted RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 GHRLQ9UBU3 117 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 RNF150Q9ULK6 438 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 A6NCN8 305 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 FAM166BA8MTA8 275 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 H0YIZ8 118 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 CYB5BO43169 146 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 ST8SIA3O43173 380 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 SPINK9Q5DT21 86 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 PLAC9Q5JTB6 97 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 SLC43A2Q8N370 569 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 GJC3Q8NFK1 279 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 ASB10Q8WXI3 467 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 NRIP2Q9BQI9 281 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 PLK3Q9H4B4 646 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 C19orf25Q9UFG5 118 aaPredicted RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 GAB2Q9UQC2 676 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 PPP1R3CQ9UQK1 317 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 IGHV1OR21-1A0A087WYE8 117 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 TUBAL3A6NHL2 446 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 MS4A18H0YCH9 400 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 ZNF217O75362 1048 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 IFNA17P01571 189 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 P04436 131 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 CHATP28329 748 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 APOBEC1P41238 236 aaKnown RBP8.44□□□□□ -1.06
TPM1-233ENST00000610733 EFNA3P52797 238 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 MPPED2Q15777 294 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 MS4A18Q3C1V0 323 aa8.44□□□□□ -1.06
TPM1-233ENST00000610733 MAJINQ3KP22 176 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms