RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TK1P04183 234 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 CD33P20138 364 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 VDAC2P45880 294 aaPredicted RBP12.03□□□□□ -0.48
CTSA-216ENST00000607212 OR12D2P58182 307 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 LOXL3P58215 753 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 KPRPQ5T749 579 aaPredicted RBP12.03□□□□□ -0.48
CTSA-216ENST00000607212 BCL2L15Q5TBC7 163 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 DEGS2Q6QHC5 323 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 GDPD3Q7L5L3 318 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 TMEM179BQ7Z7N9 219 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 ASB17Q8WXJ9 295 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 CNN2Q99439 309 aaKnown RBP12.03□□□□□ -0.48
CTSA-216ENST00000607212 NECAP2Q9NVZ3 263 aa12.03□□□□□ -0.48
CTSA-216ENST00000607212 TBL2Q9Y4P3 447 aaKnown RBP12.03□□□□□ -0.48
CTSA-216ENST00000607212 FAM230AA0A1W2PPH8 454 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 ZNF254O75437 659 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 ALDOBP05062 364 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 PF4V1P10720 104 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 PRKACGP22612 351 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 ACTR3P61158 418 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 CDK5Q00535 292 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 COL10A1Q03692 680 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 SLC34A1Q06495 639 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 MFGE8Q08431 387 aaPredicted RBP12.02□□□□□ -0.49
CTSA-216ENST00000607212 EDDM3AQ14507 147 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 CRIP3Q6Q6R5 217 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 ZNF679Q8IYX0 411 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 HS3ST5Q8IZT8 346 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 NDNFQ8TB73 568 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 ITFG2Q969R8 447 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 ASB9Q96DX5 294 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 OR8B4Q96RC9 309 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 CITED2Q99967 270 aaPredicted RBP12.02□□□□□ -0.49
CTSA-216ENST00000607212 PLEKHA1Q9HB21 404 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 H2AFY2Q9P0M6 372 aaPredicted RBP12.02□□□□□ -0.49
CTSA-216ENST00000607212 NUFIP1Q9UHK0 495 aaKnown RBP12.02□□□□□ -0.49
CTSA-216ENST00000607212 COPS3Q9UNS2 423 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 SLC22A13Q9Y226 551 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 HILPDAQ9Y5L2 63 aa12.02□□□□□ -0.49
CTSA-216ENST00000607212 H3BSH0 61 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 EBAG9O00559 213 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 ZNF728P0DKX0 622 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 ANXA8P13928 327 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 SLC2A5P22732 501 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 ODF4Q2M2E3 257 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 PLEKHG7Q6ZR37 379 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 ANGPTL5Q86XS5 388 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 ADGRG5Q8IZF4 528 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 DYNAPQ8N1N2 210 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 PIFOQ8TCI5 191 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 CAPSLQ8WWF8 208 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 MALSU1Q96EH3 234 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 CDCA4Q9BXL8 241 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 MOB1AQ9H8S9 216 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 SERTAD4Q9NUC0 356 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 AURKAIP1Q9NWT8 199 aaPredicted RBP12.01□□□□□ -0.49
CTSA-216ENST00000607212 OR52A1Q9UKL2 312 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 SLC7A11Q9UPY5 501 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 ZNF281Q9Y2X9 895 aa12.01□□□□□ -0.49
CTSA-216ENST00000607212 A6NDX4 124 aa12□□□□□ -0.49
CTSA-216ENST00000607212 ZNF670-ZNF695F2Z2N8 137 aa12□□□□□ -0.49
CTSA-216ENST00000607212 DLGAP1O14490 977 aa12□□□□□ -0.49
CTSA-216ENST00000607212 MPIG6BO95866 241 aa12□□□□□ -0.49
CTSA-216ENST00000607212 FAM107AO95990 144 aa12□□□□□ -0.49
CTSA-216ENST00000607212 TTRP02766 147 aa12□□□□□ -0.49
CTSA-216ENST00000607212 CHRM2P08172 466 aa12□□□□□ -0.49
CTSA-216ENST00000607212 CALB2P22676 271 aa12□□□□□ -0.49
CTSA-216ENST00000607212 CXCR4P61073 352 aa12□□□□□ -0.49
CTSA-216ENST00000607212 ZNF322Q6U7Q0 402 aaPredicted RBP12□□□□□ -0.49
CTSA-216ENST00000607212 CCBE1Q6UXH8 406 aaPredicted RBP12□□□□□ -0.49
CTSA-216ENST00000607212 PIGWQ7Z7B1 504 aa12□□□□□ -0.49
CTSA-216ENST00000607212 SPATA24Q86W54 205 aa12□□□□□ -0.49
CTSA-216ENST00000607212 CALHM1Q8IU99 346 aa12□□□□□ -0.49
CTSA-216ENST00000607212 SLC35F2Q8IXU6 374 aa12□□□□□ -0.49
CTSA-216ENST00000607212 C11orf42Q8N5U0 333 aa12□□□□□ -0.49
CTSA-216ENST00000607212 ZNF676Q8N7Q3 588 aa12□□□□□ -0.49
CTSA-216ENST00000607212 CANT1Q8WVQ1 401 aa12□□□□□ -0.49
CTSA-216ENST00000607212 PHF21AQ96BD5 680 aa12□□□□□ -0.49
CTSA-216ENST00000607212 ZNF714Q96N38 554 aa12□□□□□ -0.49
CTSA-216ENST00000607212 APOL4Q9BPW4 351 aa12□□□□□ -0.49
CTSA-216ENST00000607212 NRIP2Q9BQI9 281 aa12□□□□□ -0.49
CTSA-216ENST00000607212 THTPAQ9BU02 230 aa12□□□□□ -0.49
CTSA-216ENST00000607212 PRRG3Q9BZD7 231 aa12□□□□□ -0.49
CTSA-216ENST00000607212 SLC25A19Q9HC21 320 aa12□□□□□ -0.49
CTSA-216ENST00000607212 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 CCDC182A6NF36 153 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 C17orf98A8MV24 154 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 VGLL3A8MV65 326 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 PRR32B1ATL7 298 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 MAGEB4O15481 346 aaPredicted RBP11.99□□□□□ -0.49
CTSA-216ENST00000607212 NOS1APO75052 506 aaPredicted RBP11.99□□□□□ -0.49
CTSA-216ENST00000607212 DNAJC8O75937 253 aaPredicted RBP11.99□□□□□ -0.49
CTSA-216ENST00000607212 RPP14O95059 124 aaKnown RBP11.99□□□□□ -0.49
CTSA-216ENST00000607212 PF4P02776 101 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 TMEM95Q3KNT9 176 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 KHDC1LQ5JSQ8 128 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 TRAPPC6BQ86SZ2 158 aa11.99□□□□□ -0.49
CTSA-216ENST00000607212 SLAMF9Q96A28 289 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms