RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 LIME1Q9H400 295 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 FAM86C1Q9NVL1 165 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 KIAA1456Q9P272 454 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 SLC37A1P57057 533 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 RELQ04864 619 aaPredicted RBP10.91□□□□□ -0.66
CDCA3-212ENST00000604599 CPEB2Q7Z5Q1 589 aaKnown RBP10.91□□□□□ -0.66
CDCA3-212ENST00000604599 OR5L1Q8NGL2 311 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 STT3BQ8TCJ2 826 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 MMABQ96EY8 250 aaPredicted RBP10.91□□□□□ -0.66
CDCA3-212ENST00000604599 ZNF319Q9P2F9 582 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 POLR1DQ9Y2S0 133 aa10.91□□□□□ -0.66
CDCA3-212ENST00000604599 TDRD6O60522 2096 aaKnown RBP10.9□□□□□ -0.66
CDCA3-212ENST00000604599 CCDC187A0A096LP49 1063 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 FAM24AA6NFZ4 105 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 A6NIZ1 184 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 ST8SIA3O43173 380 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 NPIPB7O75200 414 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 AMBPP02760 352 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 TMEM225BP0DP42 221 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 IL12BP29460 328 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 TM4SF4P48230 202 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 RAP1BP61224 184 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 TNFRSF9Q07011 255 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 OOSP2Q86WS3 158 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 SUMF1Q8NBK3 374 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 RTN4IP1Q8WWV3 396 aaPredicted RBP10.9□□□□□ -0.66
CDCA3-212ENST00000604599 RAB24Q969Q5 203 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 GPR87Q9BY21 358 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 TBL1XR1Q9BZK7 514 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 IGKV1-9A0A0C4DH69 117 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 IL18BPO95998 194 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 IGHMP01871 453 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 LINC00271P0C7V0 271 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 SFTPCP11686 197 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 PGCP20142 388 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 GABRR1P24046 479 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 PRTGQ2VWP7 1150 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 ZNF880Q6PDB4 577 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 OR8B12Q8NGG6 310 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 ASB10Q8WXI3 467 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 NUDT22Q9BRQ3 303 aa10.9□□□□□ -0.66
CDCA3-212ENST00000604599 NXT1Q9UKK6 140 aaKnown RBP10.9□□□□□ -0.66
CDCA3-212ENST00000604599 FAM221AA4D161 298 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 PLRG1O43660 514 aaKnown RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 DBHP09172 617 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 MYOGP15173 224 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF17P17021 662 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 CEACAM6P40199 344 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 NOVA1P51513 510 aaKnown RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 POLR2HP52434 150 aaKnown RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 RPL23AP62750 156 aaKnown RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 HLA-DRB3P79483 266 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 RUNX1Q01196 453 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM187Q14656 261 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM123Q8N131 208 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 HAS2Q92819 552 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 NOL4LQ96MY1 436 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 HSF4Q9ULV5 492 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 SLC7A11Q9UPY5 501 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 SLC33A1O00400 549 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 IL13RA2Q14627 380 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 NKAIN1Q4KMZ8 207 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF776Q68DI1 518 aaPredicted RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 TANGO2Q6ICL3 276 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 LANCL3Q6ZV70 420 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 SPRED2Q7Z698 418 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 OR6X1Q8NH79 312 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 OR14L1PQ8NHC6 308 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 BOD1Q96IK1 185 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 THOC3Q96J01 351 aaKnown RBP10.89□□□□□ -0.67
CDCA3-212ENST00000604599 KCNK17Q96T54 332 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 TWSG1Q9GZX9 223 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 MYO15AQ9UKN7 3530 aa10.89□□□□□ -0.67
CDCA3-212ENST00000604599 CCDC163A0A0D9SF12 145 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 FAM230AA0A1W2PPH8 454 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 MS4A18H0YCH9 400 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 STMND1H3BQB6 276 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ONECUT2O95948 504 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 HSPB1P04792 205 aaKnown RBP10.88□□□□□ -0.67
CDCA3-212ENST00000604599 DUSP1P28562 367 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 OPRM1P35372 400 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 CSNK1A1P48729 337 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 RRADP55042 308 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 ZNF121P58317 390 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-212ENST00000604599 RAB11AP62491 216 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 GNMTQ14749 295 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 SLC10A1Q14973 349 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 MS4A18Q3C1V0 323 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 MEX3BQ6ZN04 569 aaKnown RBP10.88□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM183AQ8IXX5 376 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 FBXL14Q8N1E6 418 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 FAM89BQ8N5H3 189 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 PTPMT1Q8WUK0 201 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-212ENST00000604599 TMEM171Q8WVE6 324 aa10.88□□□□□ -0.67
CDCA3-212ENST00000604599 LIN37Q96GY3 246 aaPredicted RBP10.88□□□□□ -0.67
CDCA3-212ENST00000604599 MED12Q93074 2177 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms