RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 LHX4Q969G2 390 aa13.12□□□□□ -0.31
SFXN2-208ENST00000602660 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
SFXN2-208ENST00000602660 PKIBQ9C010 78 aa13.12□□□□□ -0.31
SFXN2-208ENST00000602660 PLEKHA1Q9HB21 404 aa13.12□□□□□ -0.31
SFXN2-208ENST00000602660 MRPS18AQ9NVS2 196 aaKnown RBP13.12□□□□□ -0.31
SFXN2-208ENST00000602660 NBEAL1Q6ZS30 2694 aa13.12□□□□□ -0.31
SFXN2-208ENST00000602660 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 GABRA2P47869 451 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 CEBPDP49716 269 aaPredicted RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 CCR9P51686 369 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 ADARB1P78563 741 aaKnown RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 PRB3Q04118 309 aaPredicted RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 IL24Q13007 206 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 IL18R1Q13478 541 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 GALEQ14376 348 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 PDCD1Q15116 288 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 SMN1Q16637 294 aaKnown RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 SMIM21Q3B7S5 101 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 OR51A4Q8NGJ6 313 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 OR52I1Q8NGK6 324 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 H1FXQ92522 213 aaKnown RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 C10orf35Q96D05 121 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 Q96MT0 163 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 ALG8Q9BVK2 526 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 ZMAT3Q9HA38 289 aaKnown RBP13.11□□□□□ -0.31
SFXN2-208ENST00000602660 ERVK13-1Q9NX77 482 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 MTCH1Q9NZJ7 389 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 ONECUT1Q9UBC0 465 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 POLDIP2Q9Y2S7 368 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 PCDHGB1Q9Y5G3 927 aa13.11□□□□□ -0.31
SFXN2-208ENST00000602660 FAM230AA0A1W2PPH8 454 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 H0YAE9 185 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 RNASEK-C17orf49H0YIS7 233 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 J3QLW9 94 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 HTR1AP08908 422 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 HKR1P10072 659 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 ZNF19P17023 458 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 NDUFB7P17568 137 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 CFPP27918 469 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 RAB40BQ12829 278 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 TMEM244Q5VVB8 128 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 C12orf54Q6X4T0 127 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 PDZD9Q8IXQ8 264 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 C8orf59Q8N0T1 100 aaPredicted RBP13.1□□□□□ -0.31
SFXN2-208ENST00000602660 SYS1Q8N2H4 156 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 TMEM185AQ8NFB2 350 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 CNIH3Q8TBE1 160 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.31
SFXN2-208ENST00000602660 SIRT7Q9NRC8 400 aa13.1□□□□□ -0.31
SFXN2-208ENST00000602660 E9PI62 339 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 HOXA3O43365 443 aaPredicted RBP13.09□□□□□ -0.31
SFXN2-208ENST00000602660 GATBO75879 557 aaKnown RBP13.09□□□□□ -0.31
SFXN2-208ENST00000602660 NXPH2O95156 264 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 MELTFP08582 738 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 LIMS3P0CW19 117 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 LIMS4P0CW20 117 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 PRDX2P32119 198 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 ACTA2P62736 377 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 ACTG2P63267 376 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 KLRD1Q13241 179 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 ALKBH1Q13686 389 aaKnown RBP13.09□□□□□ -0.31
SFXN2-208ENST00000602660 AWAT1Q58HT5 328 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 CRIP3Q6Q6R5 217 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 IZUMO2Q6UXV1 221 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 Q6YL49 198 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 UTS2BQ765I0 119 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 RNF144BQ7Z419 303 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 GATAD2BQ8WXI9 593 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 PP6455Q8WZ26 134 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
SFXN2-208ENST00000602660 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 SLC7A11Q9UPY5 501 aa13.09□□□□□ -0.31
SFXN2-208ENST00000602660 A0A0U1RQK1 487 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 H0YJX3 145 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 FADS2O95864 444 aaKnown RBP13.08□□□□□ -0.32
SFXN2-208ENST00000602660 GNAO1P09471 354 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 FUT6P51993 359 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 HCP5Q6MZN7 132 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 C1orf122Q6ZSJ8 110 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 EGFL6Q8IUX8 553 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 ZNF561Q8N587 486 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 SLC25A28Q96A46 364 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 FGGYQ96C11 551 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 JAM3Q9BX67 310 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 FGF20Q9NP95 211 aaPredicted RBP13.08□□□□□ -0.32
SFXN2-208ENST00000602660 NOX4Q9NPH5 578 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 INPP5EQ9NRR6 644 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 HHLA2Q9UM44 414 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 RPL36Q9Y3U8 105 aaKnown RBP13.08□□□□□ -0.32
SFXN2-208ENST00000602660 TRRAPQ9Y4A5 3859 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 MGAM2Q2M2H8 2515 aa13.08□□□□□ -0.32
SFXN2-208ENST00000602660 TRBV23-1A0A0A0MS06 115 aa13.07□□□□□ -0.32
SFXN2-208ENST00000602660 M0R1W7 72 aa13.07□□□□□ -0.32
SFXN2-208ENST00000602660 ZNF737O75373 536 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms