RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 IGKV1D-17A0A075B6S4 117 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 SIGLEC5O15389 551 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 OGG1O15527 345 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 PLATP00750 562 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 MT-ND2P03891 347 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 TFF1P04155 84 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 HSPA13P48723 471 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 MTCP1P56278 107 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 C6orf141Q5SZD1 244 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 IZUMO2Q6UXV1 221 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 LHFPL2Q6ZUX7 228 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 SERPINA12Q8IW75 414 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 FGFRL1Q8N441 504 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 PARP16Q8N5Y8 322 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 OR5D14Q8NGL3 314 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 OR13C9Q8NGT0 318 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 GATAD2BQ8WXI9 593 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 UPRTQ96BW1 309 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 CEP19Q96LK0 163 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 OPALINQ96PE5 141 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 OCEL1Q9H607 264 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 HES4Q9HCC6 221 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 FKBP14Q9NWM8 211 aa13.96□□□□□ -0.17
TRIM28-215ENST00000601150 RPUSD1Q9UJJ7 312 aaKnown RBP13.96□□□□□ -0.17
TRIM28-215ENST00000601150 RFPL4AA6NLU0 287 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 RFPL4AL1F8VTS6 287 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 TCF21O43680 179 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 CYB5AP00167 134 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 LALBAP00709 142 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SELLP14151 372 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 MYF6P23409 242 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 FGF12P61328 243 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 ERVK11-1P61568 191 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 DGUOKQ16854 277 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 KLF17Q5JT82 389 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SLC25A26Q70HW3 274 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 MKXQ8IYA7 352 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 BATF2Q8N1L9 274 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 ZNF485Q8NCK3 441 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 GPR148Q8TDV2 347 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 RGP1Q92546 391 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SLAMF9Q96A28 289 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SMIM19Q96E16 107 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SDSLQ96GA7 329 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 ANKRD60Q9BZ19 345 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SCN3BQ9NY72 215 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-215ENST00000601150 NUP50Q9UKX7 468 aa13.95□□□□□ -0.18
TRIM28-215ENST00000601150 SIRT4Q9Y6E7 314 aaPredicted RBP13.95□□□□□ -0.18
TRIM28-215ENST00000601150 ZNF879B4DU55 563 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 SLC1A7O00341 560 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 MYL12BO14950 172 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 KNG1P01042 644 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 CD2P06729 351 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 FPR2P25090 351 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 C21orf33P30042 268 aaPredicted RBP13.94□□□□□ -0.18
TRIM28-215ENST00000601150 PRDX2P32119 198 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 POU3F4P49335 361 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 CAV3P56539 151 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 TAS2R43P59537 309 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 CD177Q8N6Q3 437 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 MYDGFQ969H8 173 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 MTCH1Q9NZJ7 389 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 MAB21L2Q9Y586 359 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 ATRQ13535 2644 aa13.94□□□□□ -0.18
TRIM28-215ENST00000601150 SVEP1Q4LDE5 3571 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 PTGES3LE9PB15 166 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 SULT1B1O43704 296 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 ALX3O95076 343 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 CDK1P06493 297 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 NDUFB7P17568 137 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 SOX2P48431 317 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 WNT4P56705 351 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 METTL11BQ5VVY1 283 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 DMKNQ6E0U4 476 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-215ENST00000601150 Q8IYB0 196 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 BPIFB2Q8N4F0 458 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 ZNF561Q8N587 486 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 NANOGP1Q8N7R0 232 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 ZNRF1Q8ND25 227 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 LY6G5BQ8NDX9 201 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 TMEM185AQ8NFB2 350 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 ZNF418Q8TF45 676 aaPredicted RBP13.93□□□□□ -0.18
TRIM28-215ENST00000601150 H1FXQ92522 213 aaKnown RBP13.93□□□□□ -0.18
TRIM28-215ENST00000601150 DMRTB1Q96MA1 342 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 PCGF1Q9BSM1 259 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 DCTN5Q9BTE1 182 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 CNTD2Q9H8S5 307 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 ERGIC3Q9Y282 383 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 ZNF281Q9Y2X9 895 aa13.93□□□□□ -0.18
TRIM28-215ENST00000601150 F8VVB4 439 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 F8VWA3 439 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 TOX4O94842 621 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 INMTO95050 263 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 HCKP08631 526 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 IGHV4-38-2P0DP08 117 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 CEBPDP49716 269 aaPredicted RBP13.92□□□□□ -0.18
TRIM28-215ENST00000601150 CAPZA1P52907 286 aa13.92□□□□□ -0.18
TRIM28-215ENST00000601150 PDZK1IP1Q13113 114 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms