RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ACOD1A6NK06 481 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 DCTN2Q13561 401 aaKnown RBP13.37□□□□□ -0.27
USE1-208ENST00000600970 MICAQ29983 383 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 ABCA11PQ4W5N1 156 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 ETV3LQ6ZN32 361 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 RNF144BQ7Z419 303 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 MRPL41Q8IXM3 137 aaKnown RBP13.37□□□□□ -0.27
USE1-208ENST00000600970 ASCC1Q8N9N2 400 aaKnown RBP13.37□□□□□ -0.27
USE1-208ENST00000600970 TEX47Q8TBZ9 253 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 ZNF714Q96N38 554 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 TEAD3Q99594 435 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 MYLK2Q9H1R3 596 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 LIN7BQ9HAP6 207 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 GPR84Q9NQS5 396 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 VNN3Q9NY84 501 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 ENPP5Q9UJA9 477 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 SLC22A13Q9Y226 551 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 U3KQK5 164 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 U3KQV3 271 aa13.37□□□□□ -0.27
USE1-208ENST00000600970 IGHV2-26A0A0B4J1V2 119 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 TMEM269A0A1B0GVZ9 245 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 PRR23D1E9PI22 279 aaPredicted RBP13.36□□□□□ -0.27
USE1-208ENST00000600970 PSMD9O00233 223 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 ZNF737O75373 536 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 CHRM2P08172 466 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 CCDC159P0C7I6 412 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 PRR23D2P0DMB1 279 aaPredicted RBP13.36□□□□□ -0.27
USE1-208ENST00000600970 H2AFXP16104 143 aaPredicted RBP13.36□□□□□ -0.27
USE1-208ENST00000600970 ALOX5APP20292 161 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 CD24P25063 80 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 PRDX6P30041 224 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 MAGEA2P43356 314 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 HCCSP53701 268 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 ERVK11-1P61568 191 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 PLBD1Q6P4A8 553 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 GDPD3Q7L5L3 318 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 AKR1E2Q96JD6 320 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 NIPSNAP1Q9BPW8 284 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 CHID1Q9BWS9 393 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 PBOV1Q9GZY1 135 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 LAMP5Q9UJQ1 280 aa13.36□□□□□ -0.27
USE1-208ENST00000600970 PQLC2LA1A4F0 135 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 NHLRC4P0CG21 123 aaPredicted RBP13.35□□□□□ -0.27
USE1-208ENST00000600970 MPZP25189 248 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 MEF2CQ06413 473 aaPredicted RBP13.35□□□□□ -0.27
USE1-208ENST00000600970 LCN1P1Q5VSP4 162 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 ASRGL1Q7L266 308 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 ZNF676Q8N7Q3 588 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 CDRT15Q96T59 188 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 SLC25A33Q9BSK2 321 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 GPR173Q9NS66 373 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 SESN1Q9Y6P5 492 aa13.35□□□□□ -0.27
USE1-208ENST00000600970 SH2D7A6NKC9 451 aaPredicted RBP13.34□□□□□ -0.27
USE1-208ENST00000600970 H3BN98 237 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 DHRS3O75911 302 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 AMY1AP04745 511 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 AMY2AP04746 511 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 HTR1DP28221 377 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 IL18R1Q13478 541 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 CLVS2Q5SYC1 327 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 TMEM42Q69YG0 159 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 DEGS2Q6QHC5 323 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 CD300LDQ6UXZ3 194 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 ANGPTL5Q86XS5 388 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 PGAM4Q8N0Y7 254 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 OR8H2Q8N162 312 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 OR51D1Q8NGF3 324 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 OR4P4Q8NGL7 312 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 CAPSLQ8WWF8 208 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 STMN2Q93045 179 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 ZNF649Q9BS31 505 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 CLEC7AQ9BXN2 247 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 TMEM133Q9H2Q1 129 aa13.34□□□□□ -0.27
USE1-208ENST00000600970 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
USE1-208ENST00000600970 DLGAP1O14490 977 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 PRODHO43272 600 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.28
USE1-208ENST00000600970 TTRP02766 147 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 THBS3P49746 956 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 EDDM3AQ14507 147 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 KCTD18Q6PI47 426 aaPredicted RBP13.33□□□□□ -0.28
USE1-208ENST00000600970 CYP2R1Q6VVX0 501 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 ZBTB49Q6ZSB9 765 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 TPRX1Q8N7U7 411 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 BBS1Q8NFJ9 593 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 BCAS4Q8TDM0 211 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 SNX22Q96L94 193 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.28
USE1-208ENST00000600970 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
USE1-208ENST00000600970 REEP1Q9H902 201 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 NUFIP1Q9UHK0 495 aaKnown RBP13.33□□□□□ -0.28
USE1-208ENST00000600970 LINC00312Q9Y6C7 94 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 RYR2Q92736 4967 aa13.33□□□□□ -0.28
USE1-208ENST00000600970 hADV38S2A0JD32 116 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 TMEM82A0PJX8 343 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 PRR32B1ATL7 298 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 F8VVB4 439 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 F8VWA3 439 aa13.32□□□□□ -0.28
USE1-208ENST00000600970 C3orf84H3BNL1 204 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms