RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PCGF1Q9BSM1 259 aa23.34■■□□□ 1.33
SSBP4-206ENST00000599699 SLC25A10Q9UBX3 287 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-206ENST00000599699 CLEC2DQ9UHP7 191 aa23.34■■□□□ 1.33
SSBP4-206ENST00000599699 RPUSD1Q9UJJ7 312 aaKnown RBP23.34■■□□□ 1.33
SSBP4-206ENST00000599699 DHDHQ9UQ10 334 aa23.34■■□□□ 1.33
SSBP4-206ENST00000599699 COL6A5A8TX70 2615 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 RFPL4AA6NLU0 287 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 ZNF879B4DU55 563 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 RFPL4AL1F8VTS6 287 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 GPR37O15354 613 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 NDUFB7P17568 137 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 AZGP1P25311 298 aaKnown RBP23.33■■□□□ 1.33
SSBP4-206ENST00000599699 MTCP1P56278 107 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 DGUOKQ16854 277 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 RPL22L1Q6P5R6 122 aaKnown RBP23.33■■□□□ 1.33
SSBP4-206ENST00000599699 SLC25A26Q70HW3 274 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 DNAAF1Q8NEP3 725 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 OR13C9Q8NGT0 318 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 SLAMF9Q96A28 289 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 SUCNR1Q9BXA5 334 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 VCX3BQ9H321 246 aa23.33■■□□□ 1.33
SSBP4-206ENST00000599699 IGKV1-9A0A0C4DH69 117 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 CAPZA1P52907 286 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 CCDC58Q4VC31 144 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 METTL11BQ5VVY1 283 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 LAIR2Q6ISS4 152 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 STX19Q8N4C7 294 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 TMEM185AQ8NFB2 350 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 FBLIM1Q8WUP2 373 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 GATAD2BQ8WXI9 593 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 MS4A7Q9GZW8 240 aaPredicted RBP23.32■■□□□ 1.32
SSBP4-206ENST00000599699 CNTD2Q9H8S5 307 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 BABAM2Q9NXR7 383 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 CNOT2Q9NZN8 540 aaKnown RBP23.32■■□□□ 1.32
SSBP4-206ENST00000599699 ZNF69Q9UC07 566 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 PSORS1C1Q9UIG5 152 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 ZNF222Q9UK12 451 aa23.32■■□□□ 1.32
SSBP4-206ENST00000599699 A0A0A6YYJ9 748 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 TRAV40A0A0B4J280 105 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 H0YJX3 145 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 TOX4O94842 621 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 IGHV4-38-2P0DP08 117 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 PIPP12273 146 aaPredicted RBP23.31■■□□□ 1.32
SSBP4-206ENST00000599699 POU3F4P49335 361 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 ARF6P62330 175 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 XAF1Q6GPH4 301 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 LHFPL2Q6ZUX7 228 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 AHSA2Q719I0 299 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 ZNRF1Q8ND25 227 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 SPSB1Q96BD6 273 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 CEP19Q96LK0 163 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 OPALINQ96PE5 141 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 ZCCHC4Q9H5U6 513 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 NEK6Q9HC98 313 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 ONECUT1Q9UBC0 465 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 OR14J1Q9UGF5 321 aa23.31■■□□□ 1.32
SSBP4-206ENST00000599699 CYB5AP00167 134 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 SFTPBP07988 381 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 PRDX2P32119 198 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 CDK5R1Q15078 307 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 KRTAP24-1Q3LI83 254 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 SERPINA12Q8IW75 414 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 OR5D14Q8NGL3 314 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 OR52N1Q8NH53 320 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 SDSLQ96GA7 329 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 WDFY2Q96P53 400 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 DCTN5Q9BTE1 182 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 PLCXD1Q9NUJ7 323 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 MTCH1Q9NZJ7 389 aa23.3■■□□□ 1.32
SSBP4-206ENST00000599699 SLC1A7O00341 560 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 VENTXO95231 258 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 CEBPDP49716 269 aaPredicted RBP23.29■■□□□ 1.32
SSBP4-206ENST00000599699 ERVK11-1P61568 191 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 RBMS3Q6XE24 437 aaKnown RBP23.29■■□□□ 1.32
SSBP4-206ENST00000599699 MKXQ8IYA7 352 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 CD177Q8N6Q3 437 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 RFT1Q96AA3 541 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 HES4Q9HCC6 221 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 MAB21L2Q9Y586 359 aa23.29■■□□□ 1.32
SSBP4-206ENST00000599699 SOX2P48431 317 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 CAV3P56539 151 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 GPR157Q5UAW9 335 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 USP43Q70EL4 1123 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 BCL6BQ8N143 479 aaPredicted RBP23.28■■□□□ 1.32
SSBP4-206ENST00000599699 GPR148Q8TDV2 347 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 SPACA5Q96QH8 159 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 JMJD8Q96S16 334 aa23.28■■□□□ 1.32
SSBP4-206ENST00000599699 ELL3Q9HB65 397 aaPredicted RBP23.28■■□□□ 1.32
SSBP4-206ENST00000599699 A0A1W2PQ09 198 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 KNG1P01042 644 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 HCKP08631 526 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 CMTM4Q8IZR5 234 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 ZNF561Q8N587 486 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 PARP16Q8N5Y8 322 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 LY6G5BQ8NDX9 201 aa23.27■■□□□ 1.32
SSBP4-206ENST00000599699 SIRT4Q9Y6E7 314 aaPredicted RBP23.27■■□□□ 1.32
SSBP4-206ENST00000599699 F8VVB4 439 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 F8VWA3 439 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 MYL12BO14950 172 aa23.26■■□□□ 1.31
SSBP4-206ENST00000599699 SPRY1O43609 319 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms