RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 PNKDQ8N490 385 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 OR13D1Q8NGV5 346 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 OR14K1Q8NGZ2 314 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 OR2T27Q8NH04 317 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 UTP4Q969X6 686 aaKnown RBP11.06□□□□□ -0.64
TRIM28-211ENST00000597968 OR52A1Q9UKL2 312 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 SLC7A11Q9UPY5 501 aa11.06□□□□□ -0.64
TRIM28-211ENST00000597968 PRR32B1ATL7 298 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 ZNF670-ZNF695F2Z2N8 137 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 K7N7A8 449 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 M0R129 80 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 CHRM2P08172 466 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 EPHA2P29317 976 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 DYNLT3P51808 116 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 DLX1P56177 255 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 MEF2CQ06413 473 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-211ENST00000597968 BNIP1Q12981 228 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 DMRTC1Q5HYR2 192 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 KPRPQ5T749 579 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-211ENST00000597968 AADACL4Q5VUY2 407 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 Q8IYB0 196 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 Q8N2B8 174 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 OR11H6Q8NGC7 330 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 TMEM163Q8TC26 289 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 PPP1R14AQ96A00 147 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 TTTY10Q9BZA0 68 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 ELL3Q9HB65 397 aaPredicted RBP11.05□□□□□ -0.64
TRIM28-211ENST00000597968 COPS3Q9UNS2 423 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 WNK1Q9H4A3 2382 aa11.05□□□□□ -0.64
TRIM28-211ENST00000597968 NOTCH1P46531 2555 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 A0A1B0GTI1 187 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 SYNGR1O43759 233 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 XPNPEP2O43895 674 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 PRKYO43930 277 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 GATBO75879 557 aaKnown RBP11.04□□□□□ -0.64
TRIM28-211ENST00000597968 SULT1C4O75897 302 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 TFF1P04155 84 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 EMX1Q04741 257 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-211ENST00000597968 TMED1Q13445 227 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 SLX4IPQ5VYV7 408 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 ZBTB49Q6ZSB9 765 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 SLC35F2Q8IXU6 374 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 ENTHD1Q8IYW4 607 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 PPP1R35Q8TAP8 253 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
TRIM28-211ENST00000597968 PIFOQ8TCI5 191 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 ADGRL4Q9HBW9 690 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 WARS2Q9UGM6 360 aaKnown RBP11.04□□□□□ -0.64
TRIM28-211ENST00000597968 SLC22A13Q9Y226 551 aa11.04□□□□□ -0.64
TRIM28-211ENST00000597968 ZAR1LA6NP61 321 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 ODF3BA8MYP8 253 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 MAGEB4O15481 346 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-211ENST00000597968 SERPINA3P01011 423 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 ALDOBP05062 364 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 KRT8P05787 483 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 OR2T7P0C7T2 308 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 ZNF728P0DKX0 622 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 FUT6P51993 359 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 PRB3Q04118 309 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-211ENST00000597968 MFGE8Q08431 387 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-211ENST00000597968 MINOS1Q5TGZ0 78 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 ZNF626Q68DY1 528 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 C12orf73Q69YU5 71 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 ASRGL1Q7L266 308 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 AMIGO2Q86SJ2 522 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 KLHDC1Q8N7A1 406 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 RPS4Y2Q8TD47 263 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 PLEKHA1Q9HB21 404 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 ABCB10Q9NRK6 738 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 KRT84Q9NSB2 600 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 GTF2A1LQ9UNN4 478 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 TCF19Q9Y242 345 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 MINOS1-NBL1R4GNA1 71 aa11.03□□□□□ -0.64
TRIM28-211ENST00000597968 G3V2T6 193 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF737O75373 536 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 AZGP1P25311 298 aaKnown RBP11.02□□□□□ -0.65
TRIM28-211ENST00000597968 DLX6P56179 175 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 LY6EQ16553 131 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 BEAN1Q3B7T3 259 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 FBLN7Q53RD9 439 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 SAMD5Q5TGI4 173 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 KDM4DQ6B0I6 523 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 GDPD3Q7L5L3 318 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 ZDHHC13Q8IUH4 622 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 OR8H2Q8N162 312 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 TCEANCQ8N8B7 351 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 DNAAF1Q8NEP3 725 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 C17orf50Q8WW18 174 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 PP6455Q8WZ26 134 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 RORBQ92753 470 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 SNX22Q96L94 193 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 CEP19Q96LK0 163 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 APOL4Q9BPW4 351 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 OSBPL10Q9BXB5 764 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 CHST5Q9GZS9 411 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 GABARAPL1Q9H0R8 117 aa11.02□□□□□ -0.65
TRIM28-211ENST00000597968 MRM2Q9UI43 246 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms