RNA–Protein interactions for RNA: ENST00000597172.5

TRIM28-208, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-208ENST00000597172 IDNKQ5T6J7 187 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 ASCL4Q6XD76 172 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 JAGN1Q8N5M9 183 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.96□□□□□ -1.14
TRIM28-208ENST00000597172 SPERTQ8NA61 448 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 SCCPDHQ8NBX0 429 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 IGFBPL1Q8WX77 278 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 ELMOD3Q96FG2 381 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 MEGF10Q96KG7 1140 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 C1orf147Q96MC9 270 aaPredicted RBP7.96□□□□□ -1.14
TRIM28-208ENST00000597172 OR2V2Q96R30 315 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 UQCC2Q9BRT2 126 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 RTL8AQ9BWD3 113 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 TLNRD1Q9H1K6 362 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 CCDC59Q9P031 241 aaKnown RBP7.96□□□□□ -1.14
TRIM28-208ENST00000597172 STEAP1Q9UHE8 339 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 DAPK2Q9UIK4 370 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 ZDHHC8Q9ULC8 765 aa7.96□□□□□ -1.14
TRIM28-208ENST00000597172 NOP16Q9Y3C1 178 aaKnown RBP7.96□□□□□ -1.14
TRIM28-208ENST00000597172 IGKV1-12A0A0C4DH73 117 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-208ENST00000597172 TMEM210A6NLX4 147 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 C3orf80F5H4A9 247 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 M0R233 179 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 LDLRAD4O15165 306 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 RHBDL1O75783 438 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 PAHP00439 452 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 IGKV1D-12P01611 117 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 GRPP07492 148 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 CD55P08174 381 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 OCMP0CE72 109 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-208ENST00000597172 HTR2CP28335 458 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 HAAOP46952 286 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 QRFPP83859 136 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 PLA2G7Q13093 441 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 ZNF154Q13106 437 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 RIN1Q13671 783 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 P2RY14Q15391 338 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 RAB11BQ15907 218 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 DGUOKQ16854 277 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 C2orf76Q3KRA6 126 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 AGAP6Q5VW22 663 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 PRAMEF6Q5VXH4 476 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 HAGHLQ6PII5 290 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-208ENST00000597172 GLIPR1L1Q6UWM5 242 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 ZNF573Q86YE8 665 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 CROCCP3Q8IVE0 287 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 CELF2-AS1Q8N7Q2 184 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 OR51D1Q8NGF3 324 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 OR5D18Q8NGL1 313 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 OR6M1Q8NGM8 313 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 OR5H6Q8NGV6 325 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 ITLN1Q8WWA0 313 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 AQP3Q92482 292 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 SORCS2Q96PQ0 1159 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 DIRC2Q96SL1 478 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 GPER1Q99527 375 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 MS4A5Q9H3V2 200 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 KCNK15Q9H427 330 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 PLGRKTQ9HBL7 147 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 NEK6Q9HC98 313 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 C14orf119Q9NWQ9 140 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 MTCH1Q9NZJ7 389 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 OR5V1Q9UGF6 321 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 IL19Q9UHD0 177 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 LAMP3Q9UQV4 416 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 MRPS28Q9Y2Q9 187 aaKnown RBP7.95□□□□□ -1.14
TRIM28-208ENST00000597172 RAI1Q7Z5J4 1906 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-208ENST00000597172 PLCE1Q9P212 2302 aa7.95□□□□□ -1.14
TRIM28-208ENST00000597172 A0A075B6Q4 140 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 LRP5LA4QPB2 252 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 F8VVB4 439 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 F8VWA3 439 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 CTDSP2O14595 271 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 CDIPTO14735 213 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 ANGPTL7O43827 346 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 TMEM127O75204 238 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 PLATP00750 562 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 TMEM225BP0DP42 221 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 SNRPBP14678 240 aaKnown RBP7.94□□□□□ -1.14
TRIM28-208ENST00000597172 MPZP25189 248 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 GATA4P43694 442 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 POU3F4P49335 361 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 SRP9P49458 86 aaKnown RBP7.94□□□□□ -1.14
TRIM28-208ENST00000597172 PPOXP50336 477 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 SNRPD2P62316 118 aaKnown RBP7.94□□□□□ -1.14
TRIM28-208ENST00000597172 CCL8P80075 99 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 TNFAIP6P98066 277 aaPredicted RBP7.94□□□□□ -1.14
TRIM28-208ENST00000597172 ZNF404Q494X3 552 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 FAM209AQ5JX71 171 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 OR10K2Q6IF99 312 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 ZNF826PQ6ZT77 177 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 SLC25A26Q70HW3 274 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 ZSCAN4Q8NAM6 433 aaPredicted RBP7.94□□□□□ -1.14
TRIM28-208ENST00000597172 PXT1Q8NFP0 134 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 OR51F2Q8NH61 342 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 TNFAIP8L1Q8WVP5 186 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 FAM3DQ96BQ1 224 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 C1orf159Q96HA4 380 aa7.94□□□□□ -1.14
TRIM28-208ENST00000597172 PKIBQ9C010 78 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms