RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ZNF841Q6ZN19 808 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 ACP7Q6ZNF0 438 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 LHFPL2Q6ZUX7 228 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 SLC25A26Q70HW3 274 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 UTS2BQ765I0 119 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 RNF144BQ7Z419 303 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 POC1AQ8NBT0 407 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 OR5D18Q8NGL1 313 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 OR5D14Q8NGL3 314 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 H1FXQ92522 213 aaKnown RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 GHSRQ92847 366 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 SMIM19Q96E16 107 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 OR5M11Q96RB7 305 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 ZNF184Q99676 751 aaPredicted RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 NUDT16L1Q9BRJ7 211 aaKnown RBP9.22□□□□□ -0.93
LIG1-211ENST00000596457 MRI1Q9BV20 369 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 MND1Q9BWT6 205 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 TMPRSS13Q9BYE2 586 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 PKIBQ9C010 78 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 Q9H521 79 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 SMURF1Q9HCE7 757 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 TAS2R4Q9NYW5 299 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 DOCK11Q5JSL3 2073 aa9.22□□□□□ -0.93
LIG1-211ENST00000596457 IGHV2-70DA0A0C4DH43 119 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 A0A1W2PPK0 400 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 RFPL4AA6NLU0 287 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 A8MXK9 166 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 RFPL4AL1F8VTS6 287 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 MAGEB3O15480 346 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 SULT1B1O43704 296 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 CYB5AP00167 134 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 CD2P06729 351 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 HSMCR30P0CW71 290 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 PSG2P11465 335 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 NDUFB7P17568 137 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 RAB3AP20336 220 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 CPT2P23786 658 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 NPY4RP50391 375 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 SLC35A2P78381 396 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 IL24Q13007 206 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 DOC2BQ14184 412 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 SMIM21Q3B7S5 101 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 LRRC10Q5BKY1 277 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 RBM48Q5RL73 367 aaKnown RBP9.21□□□□□ -0.94
LIG1-211ENST00000596457 CD276Q5ZPR3 534 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 STUMQ69YW2 141 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 BTN2A1Q7KYR7 527 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 MKXQ8IYA7 352 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 ZNF485Q8NCK3 441 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 TMEM185AQ8NFB2 350 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 ANGPTL6Q8NI99 470 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 RAB40AQ8WXH6 277 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 TMEM106AQ96A25 262 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 C12orf43Q96C57 262 aaKnown RBP9.21□□□□□ -0.94
LIG1-211ENST00000596457 CEP19Q96LK0 163 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 GAFA1Q96PS6 74 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 GPER1Q99527 375 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 RASL12Q9NYN1 266 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 MTCH1Q9NZJ7 389 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 INSIG2Q9Y5U4 225 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 AUP1Q9Y679 476 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 MXRA5Q9NR99 2828 aa9.21□□□□□ -0.94
LIG1-211ENST00000596457 IGKV1D-17A0A075B6S4 117 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 IGHV3OR16-10A0A075B7F0 116 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 C22orf46C9J442 243 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 F8VVB4 439 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 F8VWA3 439 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 J3QLI3 93 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 ANGPTL7O43827 346 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 ACAA1P09110 424 aaPredicted RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 TMEM225BP0DP42 221 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 AMY2BP19961 511 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 BCL3P20749 454 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 GATA3P23771 443 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 CRHBPP24387 322 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 MPZP25189 248 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 PRDX2P32119 198 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 MAP2K4P45985 399 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 IL13RA1P78552 427 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 ZNF788Q6ZQV5 615 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 C1orf229Q6ZS94 237 aaPredicted RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 PARP16Q8N5Y8 322 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 ZNRF1Q8ND25 227 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 DNAAF1Q8NEP3 725 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 OR51A2Q8NGJ7 313 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 RPS4Y2Q8TD47 263 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 EMG1Q92979 244 aaKnown RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 SPSB1Q96BD6 273 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 MED30Q96HR3 178 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 NKX3-1Q99801 234 aaPredicted RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 CDCA4Q9BXL8 241 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 ELL3Q9HB65 397 aaPredicted RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 KAAG1Q9UBP8 84 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 SLC25A10Q9UBX3 287 aaPredicted RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 METRNQ9UJH8 293 aa9.2□□□□□ -0.94
LIG1-211ENST00000596457 POLR3KQ9Y2Y1 108 aaPredicted RBP9.2□□□□□ -0.94
LIG1-211ENST00000596457 ZANQ9Y493 2812 aa9.19□□□□□ -0.94
LIG1-211ENST00000596457 PPIAL4CA0A0B4J2A2 164 aa9.19□□□□□ -0.94
LIG1-211ENST00000596457 KIR2DS1A0A191URI9 304 aa9.19□□□□□ -0.94
LIG1-211ENST00000596457 ENSAO43768 121 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms