RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 C20orf196Q8IYI0 205 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 OR8U1Q8NH10 309 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 NPRL2Q8WTW4 380 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 PIGTQ969N2 578 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 SGK3Q96BR1 496 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 CMSS1Q9BQ75 279 aaKnown RBP10.79□□□□□ -0.68
PDE4A-207ENST00000590407 SF3B5Q9BWJ5 86 aaKnown RBP10.79□□□□□ -0.68
PDE4A-207ENST00000590407 SMDT1Q9H4I9 107 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 NXT1Q9UKK6 140 aaKnown RBP10.79□□□□□ -0.68
PDE4A-207ENST00000590407 CEP192Q8TEP8 1941 aa10.79□□□□□ -0.68
PDE4A-207ENST00000590407 PCP4L1A6NKN8 68 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 C1orf196B1AJZ1 125 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 NPIPA2E9PIF3 369 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 NPIPA3F8WFD2 350 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 SMIM6P0DI80 62 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 TMEM225BP0DP42 221 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 GABRR1P24046 479 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 DUSP1P28562 367 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 KCNJ3P48549 501 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 MTCP1P56278 107 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 DSCR4P56555 118 aaPredicted RBP10.78□□□□□ -0.68
PDE4A-207ENST00000590407 SMAD2Q15796 467 aaKnown RBP10.78□□□□□ -0.68
PDE4A-207ENST00000590407 GALNTL5Q7Z4T8 443 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 MAML2Q8IZL2 1156 aaPredicted RBP10.78□□□□□ -0.68
PDE4A-207ENST00000590407 ZNF561Q8N587 486 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 ZIC4Q8N9L1 334 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 LFNGQ8NES3 379 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 ERGIC1Q969X5 290 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 HIST1H2BAQ96A08 127 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 LIME1Q9H400 295 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 ELL3Q9HB65 397 aaPredicted RBP10.78□□□□□ -0.68
PDE4A-207ENST00000590407 AK3Q9UIJ7 227 aa10.78□□□□□ -0.68
PDE4A-207ENST00000590407 LSM5Q9Y4Y9 91 aaKnown RBP10.78□□□□□ -0.68
PDE4A-207ENST00000590407 C5orf52A6NGY3 159 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 PRSS44E7EML9 344 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 CST2P09228 141 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 MYF5P13349 255 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 LIFP15018 202 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 AGAP20933 346 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 PCOLCEQ15113 449 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 RSU1Q15404 277 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 FOXRED2Q8IWF2 684 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 LGI3Q8N145 548 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 GPR137CQ8N3F9 429 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 HPSE2Q8WWQ2 592 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 RTN4IP1Q8WWV3 396 aaPredicted RBP10.77□□□□□ -0.68
PDE4A-207ENST00000590407 MOB3AQ96BX8 217 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 MSI2Q96DH6 328 aaKnown RBP10.77□□□□□ -0.68
PDE4A-207ENST00000590407 MALSU1Q96EH3 234 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 AKR1E2Q96JD6 320 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 ZNF385AQ96PM9 386 aaKnown RBP10.77□□□□□ -0.68
PDE4A-207ENST00000590407 USB1Q9BQ65 265 aaKnown RBP10.77□□□□□ -0.68
PDE4A-207ENST00000590407 SYT3Q9BQG1 590 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 DUSP23Q9BVJ7 150 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 PHF7Q9BWX1 381 aaPredicted RBP10.77□□□□□ -0.68
PDE4A-207ENST00000590407 RGCCQ9H4X1 137 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 SH2D2AQ9NP31 389 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 PLEK2Q9NYT0 353 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 TMED3Q9Y3Q3 217 aa10.77□□□□□ -0.68
PDE4A-207ENST00000590407 DNAH14Q0VDD8 3507 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 MASP2O00187 686 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 UBE2CO00762 179 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 SYNGR3O43761 229 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 ACKR3P25106 362 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 MAS1LP35410 378 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 SRPXP78539 464 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 RHEBQ15382 184 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 GUK1Q16774 197 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 ABCA11PQ4W5N1 156 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 MIDNQ504T8 468 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 FAM185AQ8N0U4 392 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 CCDC71LQ8N9Z2 235 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 OR8G5Q8NG78 346 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 SECTM1Q8WVN6 248 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 ABHD14BQ96IU4 210 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 HDHD3Q9BSH5 251 aaPredicted RBP10.77□□□□□ -0.69
PDE4A-207ENST00000590407 FAAP24Q9BTP7 215 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 RSRP1Q9BUV0 290 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 ULBP2Q9BZM5 246 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 BCO1Q9HAY6 547 aa10.77□□□□□ -0.69
PDE4A-207ENST00000590407 FBXO9Q9UK97 447 aaPredicted RBP10.77□□□□□ -0.69
PDE4A-207ENST00000590407 PTRH2Q9Y3E5 179 aaKnown RBP10.77□□□□□ -0.69
PDE4A-207ENST00000590407 IGHV5-10-1A0A0J9YXX1 117 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 OR6C6A6NF89 314 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 ZNF850A8MQ14 1090 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 AGPAT2O15120 278 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 ZIC3O60481 467 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 OR5AC1P0C628 307 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 RBP2P50120 134 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 RAB1AP62820 205 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 RAC1P63000 192 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 EXT1Q16394 746 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 SRSF7Q16629 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
PDE4A-207ENST00000590407 SNAI3Q3KNW1 292 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 PPP1R3BQ86XI6 285 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 C14orf79Q96F83 325 aa10.76□□□□□ -0.69
PDE4A-207ENST00000590407 CLCC1Q96S66 551 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms