RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PRSS50	Q9UI38	385 aa		13.4	□□□□□ -0.26
DDX39A-209	ENST00000589318	RNF222	A6NCQ9	220 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318		M0R135	149 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	SS18L1	O75177	396 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	RLN1	P04808	185 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	BTF3	P20290	206 aa	Known RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	GUSBP1	Q15486	140 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	C9orf135	Q5VTT2	229 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	DCAF12L2	Q5VW00	463 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	FAM166A	Q6J272	317 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	RPUSD3	Q6P087	351 aa	Known RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	LYPD6	Q86Y78	171 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	KDF1	Q8NAX2	398 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	AKR7L	Q8NHP1	331 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	SARAF	Q96BY9	339 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	FGGY	Q96C11	551 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF799	Q96GE5	643 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	LYZL4	Q96KX0	146 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF471	Q9BX82	626 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	OPA3	Q9H6K4	179 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	GPR84	Q9NQS5	396 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	TMEM100	Q9NV29	134 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR5V1	Q9UGF6	321 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	TIMM10B	Q9Y5J6	103 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	SVIL	O95425	2214 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	COLCA2	A8K830	154 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	MKRN2OS	H3BPM6	223 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	SIGLEC5	O15389	551 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ITGA5	P08648	1049 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	CD79A	P11912	226 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	NAAA	Q02083	359 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	C11orf87	Q6NUJ2	197 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF529	Q6P280	563 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF100	Q8IYN0	542 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	PLPP7	Q8NBV4	271 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR1F12	Q8NHA8	337 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	SYNPR	Q8TBG9	265 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	RNF141	Q8WVD5	230 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	C12orf49	Q9H741	205 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	ASF1B	Q9NVP2	202 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	CKLF	Q9UBR5	152 aa		13.39	□□□□□ -0.27
DDX39A-209	ENST00000589318	PTPRQ	Q9UMZ3	2332 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	GGT3P	A6NGU5	568 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR5H14	A6NHG9	310 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	AKAIN1	P0CW23	69 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR3A2	P47893	321 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	TAS2R20	P59543	309 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	PCBD1	P61457	104 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	C2orf68	Q2NKX9	166 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	ABHD17A	Q96GS6	310 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	TRIB1	Q96RU8	372 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	VRK1	Q99986	396 aa	Predicted RBP	13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318	UFSP2	Q9NUQ7	469 aa		13.38	□□□□□ -0.27
DDX39A-209	ENST00000589318		A0A0U1RQV5	110 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF503-AS2	A6NEH8	195 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	FARS2	O95363	451 aa	Known RBP	13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	SLC6A9	P48067	706 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	TBR1	Q16650	682 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	NKPD1	Q17RQ9	610 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	SNAI3	Q3KNW1	292 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	C4orf46	Q504U0	113 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318		Q6ZSR3	168 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR5M8	Q8NGP6	311 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR14K1	Q8NGZ2	314 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	SPTSSA	Q969W0	71 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	PGAM5	Q96HS1	289 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	NKX3-1	Q99801	234 aa	Predicted RBP	13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	TMPRSS5	Q9H3S3	457 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	GLRX2	Q9NS18	164 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	UQCC1	Q9NVA1	299 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	STEAP1	Q9UHE8	339 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	RHBDD3	Q9Y3P4	386 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318		A0A096LPE4	126 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	TMEM272	A0A1B0GTI8	110 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318		A0A1W2PPZ6	126 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	LOC390937	A0A1W2PQ73	354 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	SLC17A2	O00624	439 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	XRCC3	O43542	346 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	IL18BP	O95998	194 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	CDK2	P24941	298 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	PLA2G7	Q13093	441 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	HMGN3	Q15651	99 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	PCGF3	Q3KNV8	242 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	FBXW9	Q5XUX1	488 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	DRAM2	Q6UX65	266 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	DOK3	Q7L591	496 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	P4HA3	Q7Z4N8	544 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	GCNT2	Q8N0V5	402 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	CPEB3	Q8NE35	698 aa	Known RBP	13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR4C16	Q8NGL9	310 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	SLC25A28	Q96A46	364 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	GAL3ST1	Q99999	423 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	TLNRD1	Q9H1K6	362 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	TREM2	Q9NZC2	230 aa		13.37	□□□□□ -0.27
DDX39A-209	ENST00000589318	TP53TG5	Q9Y2B4	290 aa		13.37	□□□□□ -0.27

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