RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 ARL6IP1Q15041 203 aa26.36■■□□□ 1.81
CAPNS1-206ENST00000588815 IZUMO1Q8IYV9 350 aa26.36■■□□□ 1.81
CAPNS1-206ENST00000588815 OR51T1Q8NGJ9 327 aa26.36■■□□□ 1.81
CAPNS1-206ENST00000588815 ELMOD3Q96FG2 381 aa26.36■■□□□ 1.81
CAPNS1-206ENST00000588815 DHRS9Q9BPW9 319 aa26.36■■□□□ 1.81
CAPNS1-206ENST00000588815 MTCH1Q9NZJ7 389 aa26.36■■□□□ 1.81
CAPNS1-206ENST00000588815 TRAV18A0A075B6X5 111 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 SFTPBP07988 381 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 TNFSF4P23510 183 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 MADCAM1Q13477 382 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 ZNF672Q499Z4 452 aaPredicted RBP26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 NHLRC3Q5JS37 347 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 HACD4Q5VWC8 232 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 ACBD4Q8NC06 268 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 SMIM4Q8WVI0 70 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 SLAMF9Q96A28 289 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 ABCB10Q9NRK6 738 aa26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 CISD1Q9NZ45 108 aaKnown RBP26.35■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A10PA6NDY2 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A18PA6NE21 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A16PA6NEW6 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A20PA6NIJ5 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A8PA6NJQ4 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A7PA6NKC0 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A22PA8MWA6 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A12PA8MX19 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A5PA8MXJ8 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A23PA8MXZ1 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 GABARAPH6UMI1 98 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 SYNGR1O43759 233 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 CSF3P09919 207 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A15PP0C7V4 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A13PP0C7W8 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A14PP0C7W9 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FAM90A24PP0C7X0 464 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 IL7P13232 177 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 SRP9P49458 86 aaKnown RBP26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 FGF12P61328 243 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 IL19Q9UHD0 177 aa26.34■■□□□ 1.81
CAPNS1-206ENST00000588815 ROS1P08922 2347 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 B9A039 149 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 NOS1APO75052 506 aaPredicted RBP26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 GRPP07492 148 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 BAK1Q16611 211 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 TRIQKQ629K1 86 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 SNX29P2Q8IUI4 249 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 GAL3ST1Q99999 423 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 NICN1Q9BSH3 213 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 ARFGEF3Q5TH69 2177 aa26.33■■□□□ 1.81
CAPNS1-206ENST00000588815 H3BUI4 141 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 M0R233 179 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 SULT1C2O00338 296 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 BCL3P20749 454 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 SCN1BQ07699 218 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 DAZAP2Q15038 168 aaPredicted RBP26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 MOGAT2Q3SYC2 334 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 LYSMD2Q8IV50 215 aa26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 FBXO9Q9UK97 447 aaPredicted RBP26.32■■□□□ 1.8
CAPNS1-206ENST00000588815 A0A0A6YYD4 124 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 CDIPTO14735 213 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 GSTP1P09211 210 aaKnown RBP26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 PGA5P0DJD9 388 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 GATA4P43694 442 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 NPBWR2P48146 333 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 RBM11P57052 281 aaKnown RBP26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 IFITM3Q01628 133 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 DNM1P46Q6ZS02 220 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 LINC00596Q86U02 117 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 FCAMRQ8WWV6 532 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 RAB3CQ96E17 227 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 HS3ST6Q96QI5 342 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 THAP7Q9BT49 309 aaPredicted RBP26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 AUNIPQ9H7T9 357 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 ST3GAL6Q9Y274 331 aa26.31■■□□□ 1.8
CAPNS1-206ENST00000588815 FOXI3A8MTJ6 420 aaPredicted RBP26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 C19orf84I3L1E1 186 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 TPD52L2O43399 206 aaKnown RBP26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 PLAUP00749 431 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 CD55P08174 381 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 ZNF260Q3ZCT1 412 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 STEAP3Q658P3 488 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 FBXL14Q8N1E6 418 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 LILRB1Q8NHL6 650 aaPredicted RBP26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 ERGIC1Q969X5 290 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 MEGF10Q96KG7 1140 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 MS4A5Q9H3V2 200 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 SCPEP1Q9HB40 452 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 ABCA4P78363 2273 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 C17orf100A8MU93 164 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 SPRY3O43610 288 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 RHBDL1O75783 438 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 IGHV1-46P01743 117 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 MELTFP08582 738 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 PRSS3P35030 304 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 CFHR2P36980 270 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 ERVK11-1P61568 191 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 C11orf53Q8IXP5 236 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 CHST4Q8NCG5 386 aa26.3■■□□□ 1.8
CAPNS1-206ENST00000588815 OR10Z1Q8NGY1 313 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms