RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 METAP1DQ6UB28 335 aaPredicted RBP16.07■□□□□ 0.16
TPM4-208ENST00000588410 CALHM1Q8IU99 346 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 ENTHD1Q8IYW4 607 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 CD177Q8N6Q3 437 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 Q8N7P7 452 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 PP6455Q8WZ26 134 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 LGALS12Q96DT0 336 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 METTL8Q9H825 291 aaKnown RBP16.07■□□□□ 0.16
TPM4-208ENST00000588410 EXOGQ9Y2C4 368 aaKnown RBP16.07■□□□□ 0.16
TPM4-208ENST00000588410 POMT1Q9Y6A1 747 aa16.07■□□□□ 0.16
TPM4-208ENST00000588410 LOC100130705A0A1B0GUX0 176 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PPH5 198 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 H0YAE9 185 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 OCM2P0CE71 109 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 OCMP0CE72 109 aaPredicted RBP16.06■□□□□ 0.16
TPM4-208ENST00000588410 PRB3Q04118 309 aaPredicted RBP16.06■□□□□ 0.16
TPM4-208ENST00000588410 ZNF91Q05481 1191 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 FIP1L1Q6UN15 594 aaKnown RBP16.06■□□□□ 0.16
TPM4-208ENST00000588410 RHOXF1Q8NHV9 184 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 ZNF747Q9BV97 191 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 FRRS1LQ9P0K9 344 aa16.06■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PRD5 423 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PRF3 423 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PRM7 423 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 FAM181BA6NEQ2 426 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 RNASEK-C17orf49H0YIS7 233 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 NPFFO15130 113 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 INMTO95050 263 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 FADS2O95864 444 aaKnown RBP16.05■□□□□ 0.16
TPM4-208ENST00000588410 KNG1P01042 644 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 DBTP11182 482 aaKnown RBP16.05■□□□□ 0.16
TPM4-208ENST00000588410 GABRB1P18505 474 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 CEBPDP49716 269 aaPredicted RBP16.05■□□□□ 0.16
TPM4-208ENST00000588410 ATP1B3P54709 279 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 FDX2Q6P4F2 183 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 PIP4P2Q8N4L2 257 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 ZNF555Q8NEP9 628 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 OR5D13Q8NGL4 314 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 C4orf36Q96KX1 117 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 CEP19Q96LK0 163 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 ALG8Q9BVK2 526 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 CHIAQ9BZP6 476 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 DPAGT1Q9H3H5 408 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 HES4Q9HCC6 221 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 FAM118AQ9NWS6 357 aa16.05■□□□□ 0.16
TPM4-208ENST00000588410 CYB5AP00167 134 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 PAHP00439 452 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 ISG15P05161 165 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 FBP1P09467 338 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 PRKACBP22694 351 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 RBP2P50120 134 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 CCR9P51686 369 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 ERVK11-1P61568 191 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 RPL31P62899 125 aaKnown RBP16.04■□□□□ 0.16
TPM4-208ENST00000588410 KLRD1Q13241 179 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 GALEQ14376 348 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 ZSCAN26Q16670 478 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 SHISA2Q6UWI4 295 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 SLC25A26Q70HW3 274 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 LHFPL3Q86UP9 236 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 ZNF676Q8N7Q3 588 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 SGMS2Q8NHU3 365 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 SLAMF9Q96A28 289 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 RNF166Q96A37 237 aaPredicted RBP16.04■□□□□ 0.16
TPM4-208ENST00000588410 FGGYQ96C11 551 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 UNKLQ9H9P5 680 aaKnown RBP16.04■□□□□ 0.16
TPM4-208ENST00000588410 AMBNQ9NP70 447 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 C19orf12Q9NSK7 152 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 HHLA2Q9UM44 414 aa16.04■□□□□ 0.16
TPM4-208ENST00000588410 RPL36Q9Y3U8 105 aaKnown RBP16.04■□□□□ 0.16
TPM4-208ENST00000588410 IGKV1-27A0A075B6S5 117 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 BTBD17A6NE02 478 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 POM121CA8CG34 1229 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 IGHV4-59P01825 116 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 OMGP23515 440 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 UBE2E1P51965 193 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 DLX1P56177 255 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 NANOS3P60323 173 aaKnown RBP16.03■□□□□ 0.16
TPM4-208ENST00000588410 RAB40BQ12829 278 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 ALKBH1Q13686 389 aaKnown RBP16.03■□□□□ 0.16
TPM4-208ENST00000588410 LDLRAD3Q86YD5 345 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 EGFL6Q8IUX8 553 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 ASCC1Q8N9N2 400 aaKnown RBP16.03■□□□□ 0.16
TPM4-208ENST00000588410 DNAAF1Q8NEP3 725 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 OR4M1Q8NGD0 313 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 OR13C3Q8NGS6 347 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 TAF15Q92804 592 aaKnown RBP eCLIP16.03■□□□□ 0.16
TPM4-208ENST00000588410 TNFRSF14Q92956 283 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 ADAT3Q96EY9 351 aaPredicted RBP16.03■□□□□ 0.16
TPM4-208ENST00000588410 PELI1Q96FA3 418 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 FAM234AQ9H0X4 552 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 INPP5EQ9NRR6 644 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 SMPD3Q9NY59 655 aaPredicted RBP16.03■□□□□ 0.16
TPM4-208ENST00000588410 MTCH1Q9NZJ7 389 aa16.03■□□□□ 0.16
TPM4-208ENST00000588410 SF3B6Q9Y3B4 125 aaKnown RBP16.03■□□□□ 0.16
TPM4-208ENST00000588410 hCG_1809904A0A1W2PP81 198 aa16.02■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PPE2 198 aa16.02■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PR64 198 aa16.02■□□□□ 0.16
TPM4-208ENST00000588410 A0A1W2PRV1 198 aa16.02■□□□□ 0.16
TPM4-208ENST00000588410 MEIOCA2RUB1 952 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms