RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 GINS3Q9BRX5 216 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 ULBP2Q9BZM5 246 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 IL36GQ9NZH8 169 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 FOXD3Q9UJU5 478 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-206ENST00000587730 CA14Q9ULX7 337 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 FER1L5A0AVI2 2057 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 COLCA2A8K830 154 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF850A8MQ14 1090 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 C1orf196B1AJZ1 125 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 E9PLN8 166 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 S100A8P05109 93 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 DANCRP0C864 163 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 RCC1P18754 421 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-206ENST00000587730 DUSP1P28562 367 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 SPEM2Q0P670 501 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 OR2A2Q6IF42 318 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 C20orf196Q8IYI0 205 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF100Q8IYN0 542 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 SPEM1Q8N4L4 309 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 ZNF775Q96BV0 537 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-206ENST00000587730 PBDC1Q9BVG4 233 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 CACFD1Q9UGQ2 172 aa16.22■□□□□ 0.19
DDX39A-206ENST00000587730 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 OR5H15A6NDH6 313 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 TIAF1O95411 115 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 MT-ND4LP03901 98 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 CST2P09228 141 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 PTAFRP25105 342 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 RBP2P50120 134 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 MEOX2P50222 304 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 TMEM187Q14656 261 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 MRPL14Q6P1L8 145 aaKnown RBP16.21■□□□□ 0.19
DDX39A-206ENST00000587730 FAM185AQ8N0U4 392 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 GPR137CQ8N3F9 429 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 SFT2D1Q8WV19 159 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 MRPL24Q96A35 216 aaKnown RBP16.21■□□□□ 0.19
DDX39A-206ENST00000587730 NTNG2Q96CW9 530 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 MESP1Q9BRJ9 268 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 RBM24Q9BX46 236 aaKnown RBP16.21■□□□□ 0.19
DDX39A-206ENST00000587730 BCO1Q9HAY6 547 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 TMED3Q9Y3Q3 217 aa16.21■□□□□ 0.19
DDX39A-206ENST00000587730 LSM5Q9Y4Y9 91 aaKnown RBP16.21■□□□□ 0.19
DDX39A-206ENST00000587730 F12P00748 615 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-206ENST00000587730 CRYGSP22914 178 aa16.2■□□□□ 0.18
DDX39A-206ENST00000587730 GLP1RP43220 463 aa16.2■□□□□ 0.18
DDX39A-206ENST00000587730 RSPO1Q2MKA7 263 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-206ENST00000587730 LIAT1Q6ZQX7 453 aa16.2■□□□□ 0.18
DDX39A-206ENST00000587730 RTN4IP1Q8WWV3 396 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-206ENST00000587730 SGK3Q96BR1 496 aa16.2■□□□□ 0.18
DDX39A-206ENST00000587730 ZNF286AQ9HBT8 521 aa16.2■□□□□ 0.18
DDX39A-206ENST00000587730 PHF3Q92576 2039 aaKnown RBP16.2■□□□□ 0.18
DDX39A-206ENST00000587730 A0A1B0GW64 132 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 PCP4L1A6NKN8 68 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 SGCEO43556 437 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 GLAP06280 429 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 LIFP15018 202 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 ANOS1P23352 680 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 CHATP28329 748 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 SNCAP37840 140 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 RAC1P63000 192 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 TCEAL7Q9BRU2 100 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 AK3Q9UIJ7 227 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 DKKL1Q9UK85 242 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 BDP1A6H8Y1 2624 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 IGKV1D-8A0A087WSZ0 117 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 IGHV5-10-1A0A0J9YXX1 117 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 ST8SIA3O43173 380 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 MBPP02686 304 aaPredicted RBP16.19■□□□□ 0.18
DDX39A-206ENST00000587730 CD63P08962 238 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 MYF5P13349 255 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 NFYBP25208 207 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 B2MP61769 119 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 RAET1LQ5VY80 246 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 ZNF561Q8N587 486 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 WNT2BQ93097 391 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 BORCS8Q96FH0 119 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 ABHD14BQ96IU4 210 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 C18orf12Q96KH6 178 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 TAAR9Q96RI9 348 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 GPR173Q9NS66 373 aa16.19■□□□□ 0.18
DDX39A-206ENST00000587730 PTRH2Q9Y3E5 179 aaKnown RBP16.19■□□□□ 0.18
DDX39A-206ENST00000587730 C5orf63A6NC05 138 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 TERTO14746 1132 aaKnown RBP16.18■□□□□ 0.18
DDX39A-206ENST00000587730 OR8U9P0C7N5 309 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 CAMLGP49069 296 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 IL11RAQ14626 422 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 PCOLCEQ15113 449 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 RHEBQ15382 184 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 PHYHD1Q5SRE7 291 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 TMEM42Q69YG0 159 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 LRRC18Q8N456 261 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 OR8U1Q8NH10 309 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 M1APQ8TC57 530 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 NAT6Q93015 286 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 REEP6Q96HR9 211 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 ZNF385AQ96PM9 386 aaKnown RBP16.18■□□□□ 0.18
DDX39A-206ENST00000587730 ZNF700Q9H0M5 742 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 SLC7A11Q9UPY5 501 aa16.18■□□□□ 0.18
DDX39A-206ENST00000587730 PIGBOS1A0A0B4J2F0 54 aa16.17■□□□□ 0.18
DDX39A-206ENST00000587730 SCGB1D2O95969 90 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms