RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 MYBPHQ13203 477 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 GNMTQ14749 295 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 OR13D1Q8NGV5 346 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 OR6X1Q8NH79 312 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 TOMM40LQ969M1 308 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 ZDHHC12Q96GR4 267 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 Q96M66 194 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 VN1R1Q9GZP7 353 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 NELFAQ9H3P2 528 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 IGFLR1Q9H665 355 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 SDHAF3Q9NRP4 125 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 KIAA1456Q9P272 454 aa14.39□□□□□ -0.11
RANBP3-209ENST00000587411 RAMP1O60894 148 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 KLK3P07288 261 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H1BP16401 226 aaKnown RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 SFTPDP35247 375 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 UBE2KP61086 200 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 RNF4P78317 190 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 UBE2V2Q15819 145 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 OGFOD3Q6PK18 319 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 PRSS58Q8IYP2 241 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 CCDC54Q8NEL0 328 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 C10orf35Q96D05 121 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 KLHDC7BQ96G42 594 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 LIN37Q96GY3 246 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 LYZL4Q96KX0 146 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 MRGPRX4Q96LA9 322 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 RCL1Q9Y2P8 373 aaKnown RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 PCNX3Q9H6A9 2034 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 ZNF850A8MQ14 1090 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 TRAF3IP2O43734 574 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 FBXW4P57775 412 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 EWSR1Q01844 656 aaKnown RBP eCLIP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 ELOBQ15370 118 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 BOD1Q96IK1 185 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 SYT3Q9BQG1 590 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 HDHD3Q9BSH5 251 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 LIME1Q9H400 295 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 HSF4Q9ULV5 492 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 A0A1B0GV50 99 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 RPL36A-HNRNPH2H7BZ11 118 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 BCAT2O15382 392 aaPredicted RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 CA3P07451 260 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 SMAD4Q13485 552 aaKnown RBP14.38□□□□□ -0.11
RANBP3-209ENST00000587411 COL19A1Q14993 1142 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 SLC25A53Q5H9E4 307 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 Q8WTZ3 238 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 ANGPTL4Q9BY76 406 aa14.38□□□□□ -0.11
RANBP3-209ENST00000587411 ZNF587BE7ETH6 402 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 HSD17B6O14756 317 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 HEXBP07686 556 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 ZNF41P51814 821 aaPredicted RBP14.37□□□□□ -0.11
RANBP3-209ENST00000587411 CARD17Q5XLA6 110 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 OR52M1Q8NGK5 317 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 OR2G3Q8NGZ4 309 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 OR14L1PQ8NHC6 308 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 MSI2Q96DH6 328 aaKnown RBP14.37□□□□□ -0.11
RANBP3-209ENST00000587411 DUSP15Q9H1R2 295 aaPredicted RBP14.37□□□□□ -0.11
RANBP3-209ENST00000587411 ZNF160Q9HCG1 818 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 C5orf42Q9H799 3197 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 E9PLN8 166 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 PPP1R2P9O14990 202 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 GPR37O15354 613 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 SRP19P09132 144 aaKnown RBP14.37□□□□□ -0.11
RANBP3-209ENST00000587411 QDPRP09417 244 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 CSNK1A1P48729 337 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 HIST3H3Q16695 136 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 DMRTC1Q5HYR2 192 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 SPSB3Q6PJ21 355 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 Q6ZSR3 168 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 OR4D5Q8NGN0 318 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 CDCA3Q99618 268 aaPredicted RBP14.37□□□□□ -0.11
RANBP3-209ENST00000587411 PRDM13Q9H4Q3 707 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 SLC2A9Q9NRM0 540 aa14.37□□□□□ -0.11
RANBP3-209ENST00000587411 PHF3Q92576 2039 aaKnown RBP14.36□□□□□ -0.11
RANBP3-209ENST00000587411 FAM230AA0A1W2PPH8 454 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 MED19A0JLT2 244 aaPredicted RBP14.36□□□□□ -0.11
RANBP3-209ENST00000587411 PITX3O75364 302 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HSPB1P04792 205 aaKnown RBP14.36□□□□□ -0.11
RANBP3-209ENST00000587411 FAHP16930 419 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 MSX1P28360 303 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 RBP2P50120 134 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 RND3P61587 244 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 OR10D4PQ8NGN7 298 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 TVP23CQ96ET8 276 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 METTL12A8MUP2 240 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 ZNF727A8MUV8 499 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 SHISA8B8ZZ34 492 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 MSTNO14793 375 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HSPA12AO43301 675 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 EFNA2O43921 213 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H2BKO60814 126 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H2BJP06899 126 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H2BOP23527 126 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H2BBP33778 126 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H2BDP58876 126 aa14.36□□□□□ -0.11
RANBP3-209ENST00000587411 LSM6P62312 80 aaKnown RBP14.36□□□□□ -0.11
RANBP3-209ENST00000587411 HIST1H2BCP62807 126 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms