RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PMP2P02689 132 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 TPOP07202 933 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 CCNOP22674 350 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 S100A1P23297 94 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 CD34P28906 385 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 GMFBP60983 142 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 UBE2NP61088 152 aaKnown RBP9.73□□□□□ -0.85
LIG3-204ENST00000585740 PRDX4Q13162 271 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 ZNF169Q14929 603 aaPredicted RBP9.73□□□□□ -0.85
LIG3-204ENST00000585740 GRK1Q15835 563 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 MICBQ29980 383 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 TBC1D28Q2M2D7 210 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 Q5BKY6 102 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 LIN54Q6MZP7 749 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 C11orf88Q6PI97 169 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 TFAP2EQ6VUC0 442 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 FAM214BQ7L5A3 538 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 OR56B2PQ8NGI1 322 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 FBXW5Q969U6 566 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 HIST1H2AAQ96QV6 131 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 TRIB1Q96RU8 372 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 CHIAQ9BZP6 476 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 PLSCR2Q9NRY7 297 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 VSIG4Q9Y279 399 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 NOP16Q9Y3C1 178 aaKnown RBP9.73□□□□□ -0.85
LIG3-204ENST00000585740 MPC1Q9Y5U8 109 aa9.73□□□□□ -0.85
LIG3-204ENST00000585740 PQLC2LA1A4F0 135 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 ANKRD30BLA7E2S9 258 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 ZNF850A8MQ14 1090 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 SPRY1O43609 319 aaPredicted RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 SLC22A5O76082 557 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 IL2RAP01589 272 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 GABRR1P24046 479 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 ZBTB25P24278 435 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 FPR2P25090 351 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 SNU13P55769 128 aaKnown RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 TSPAN5P62079 268 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 DHRS2Q13268 280 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 GUSBP1Q15486 140 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 SURF2Q15527 256 aaPredicted RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 CEACAM21Q3KPI0 293 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 CHRFAM7AQ494W8 412 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 INO80CQ6PI98 192 aaPredicted RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 MDP1Q86V88 176 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 TMEM200AQ86VY9 491 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 MKXQ8IYA7 352 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 ZNF843Q8N446 348 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 C1orf162Q8NEQ5 155 aaPredicted RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 SLC30A7Q8NEW0 376 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 Q8NFD4 153 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 OR11H4Q8NGC9 324 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 OR5AP2Q8NGF4 316 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 OR5A2Q8NGI9 324 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 OR6K3Q8NGY3 331 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 EMG1Q92979 244 aaKnown RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 BOD1Q96IK1 185 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 DOCK7Q96N67 2140 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 PAPOLGQ9BWT3 736 aaKnown RBP9.72□□□□□ -0.85
LIG3-204ENST00000585740 PPA2Q9H2U2 334 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 CA10Q9NS85 328 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 STARD10Q9Y365 291 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
LIG3-204ENST00000585740 A0A0B4J2A0 478 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 ZNF503-AS2A6NEH8 195 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 OR5B21A6NL26 309 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 FIGNL2A6NMB9 653 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 CD300LBA8K4G0 201 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 HMSDA8MTL9 139 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 ANGPTL7O43827 346 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 HLA-AP01891 365 aaKnown RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 HLA-GP17693 338 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 CHATP28329 748 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 SNRPD2P62316 118 aaKnown RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 SRSF4Q08170 494 aaKnown RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 FGL1Q08830 312 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 EIF2S3LQ2VIR3 472 aaKnown RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 NHLRC3Q5JS37 347 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 NKAPLQ5M9Q1 402 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 ELP2Q6IA86 826 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 RPUSD3Q6P087 351 aaKnown RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 Q6ZT83 130 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 LHFPL1Q86WI0 220 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 UXS1Q8NBZ7 420 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 TMEM185AQ8NFB2 350 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 OR51F2Q8NH61 342 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 MITD1Q8WV92 249 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 PHB2Q99623 299 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 CMSS1Q9BQ75 279 aaKnown RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 CLEC4MQ9H2X3 399 aaPredicted RBP9.71□□□□□ -0.86
LIG3-204ENST00000585740 CDH20Q9HBT6 801 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 SHPKQ9UHJ6 478 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 OPN4Q9UHM6 478 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 GPR160Q9UJ42 338 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 GPR132Q9UNW8 380 aa9.71□□□□□ -0.86
LIG3-204ENST00000585740 C9orf170A2RU37 121 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 OR2AT4A6NND4 320 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 G3V3Q6 166 aa9.7□□□□□ -0.86
LIG3-204ENST00000585740 J3QKU1 62 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms