RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 METTL17Q9H7H0 456 aaPredicted RBP11.5□□□□□ -0.57
PRKCSH-202ENST00000585540 HES4Q9HCC6 221 aa11.5□□□□□ -0.57
PRKCSH-202ENST00000585540 METRNQ9UJH8 293 aa11.5□□□□□ -0.57
PRKCSH-202ENST00000585540 ZNF281Q9Y2X9 895 aa11.5□□□□□ -0.57
PRKCSH-202ENST00000585540 AUP1Q9Y679 476 aa11.5□□□□□ -0.57
PRKCSH-202ENST00000585540 FAM230AA0A1W2PPH8 454 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 OR2AT4A6NND4 320 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 MAGEB3O15480 346 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 AKR7A2O43488 359 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 SULT1B1O43704 296 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 BMXP51813 675 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 SEC61A1P61619 476 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 ACP7Q6ZNF0 438 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 SAXO1Q8IYX7 474 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 ZNF561Q8N587 486 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 ZSCAN4Q8NAM6 433 aaPredicted RBP11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 ANGPTL6Q8NI99 470 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 FGGYQ96C11 551 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 SDSLQ96GA7 329 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 OR5M11Q96RB7 305 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 NUDT16L1Q9BRJ7 211 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 CCDC90BQ9GZT6 254 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 FAM234AQ9H0X4 552 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 CTSZQ9UBR2 303 aa11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-202ENST00000585540 WNK2Q9Y3S1 2297 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 TRBV23-1A0A0A0MS06 115 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 TRAPPC2LH3BP13 241 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 DVL1O14640 695 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 PHF1O43189 567 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 MRPS14O60783 128 aaKnown RBP11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 NXPH2O95156 264 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 RAB3AP20336 220 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 MAPK3P27361 379 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 MAP2K4P45985 399 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 ERVK11-1P61568 191 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 ARMCX4Q5H9R4 360 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 DMKNQ6E0U4 476 aaPredicted RBP11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 PRSS48Q7RTY5 328 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 KIR3DL3Q8N743 410 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 C8orf46Q8TAG6 207 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 TRMT10AQ8TBZ6 339 aaKnown RBP11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 TBC1D15Q8TC07 691 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 UPRTQ96BW1 309 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 CEP19Q96LK0 163 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 JMJD8Q96S16 334 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 GLS2Q9UI32 602 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 ZNF222Q9UK12 451 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 KPTNQ9Y664 436 aa11.48□□□□□ -0.57
PRKCSH-202ENST00000585540 A0A1W2PPH5 198 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 RHBDL1O75783 438 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 FSHBP01225 129 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 ALDOBP05062 364 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 PSG2P11465 335 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 EEF1B2P24534 225 aaKnown RBP11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 FPR2P25090 351 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 MTCP1P56278 107 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 GABARAPL2P60520 117 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 PPP3R1P63098 170 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 HOXA4Q00056 320 aaPredicted RBP11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 GPR50Q13585 617 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 Q499Y3 187 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 ZNF529Q6P280 563 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 USP43Q70EL4 1123 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 CALHM1Q8IU99 346 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 CMTM4Q8IZR5 234 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 C19orf18Q8NEA5 215 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 OR13C5Q8NGS8 318 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 PGLYRP3Q96LB9 341 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 CKLFQ9UBR5 152 aa11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 SLC25A10Q9UBX3 287 aaPredicted RBP11.47□□□□□ -0.57
PRKCSH-202ENST00000585540 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 IGKV1-9A0A0C4DH69 117 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 TRBV5-5A0A0J9YX44 114 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 ZNF879B4DU55 563 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 SYNGR1O43759 233 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 GPX5O75715 221 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 CHRM2P08172 466 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 FSTP19883 344 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 EPHA1P21709 976 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 PDCD1Q15116 288 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 MED22Q15528 200 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 SPIN3Q5JUX0 258 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 METTL11BQ5VVY1 283 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 CDH26Q8IXH8 852 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 PXT1Q8NFP0 134 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 OR13C9Q8NGT0 318 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 PPP1R35Q8TAP8 253 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 ZNF418Q8TF45 676 aaPredicted RBP11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 ST8SIA4Q92187 359 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 TMEM106AQ96A25 262 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 GAFA1Q96PS6 74 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 CCL13Q99616 98 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 DCTN5Q9BTE1 182 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 SUCNR1Q9BXA5 334 aa11.46□□□□□ -0.57
PRKCSH-202ENST00000585540 WDR13Q9H1Z4 485 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms