RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	FER1L5	A0AVI2	2057 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CFAP47	Q6ZTR5	3102 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ELOA3C	A0A087WX78	387 aa	Predicted RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TRBV5-7	A0A0A0MS05	114 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	TMEM212	A6NML5	194 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC34A2	O95436	690 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	HTR2C	P28335	458 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MPG	P29372	298 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MPL	P40238	635 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SRSF3	P84103	164 aa	Known RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CLINT1	Q14677	625 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RSPO4	Q2I0M5	234 aa	Predicted RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	HLA-DQA1	Q5Y7H0	255 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	KMT5C	Q86Y97	462 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DTWD2	Q8NBA8	298 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ADAD2	Q8NCV1	583 aa	Known RBP	10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MCHR2	Q969V1	340 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C8orf44	Q96CB5	159 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ABHD6	Q9BV23	337 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	C1orf43	Q9BWL3	253 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	MED29	Q9NX70	200 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RARRES3	Q9UL19	164 aa		10.22	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LY6G6E	A0A0G2JKS1	128 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LOC100289279	A0A1B0GTE1	492 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ZNF736	B4DX44	427 aa	Predicted RBP	10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CYB5A	P00167	134 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	HP	P00738	406 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GNB3	P16520	340 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CD34	P28906	385 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CD200	P41217	278 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	DNASE1L1	P49184	302 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	SLC17A1	Q14916	467 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	OR10W1	Q8NGF6	305 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	RPS4Y2	Q8TD47	263 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	GPX7	Q96SL4	187 aa	Predicted RBP	10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	CST11	Q9H112	138 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PTGES2	Q9H7Z7	377 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	PRODH2	Q9UF12	536 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	VSIG4	Q9Y279	399 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	LRP12	Q9Y561	859 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	ETV7	Q9Y603	341 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063		U3KQA8	63 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	FAM186A	A6NE01	2351 aa		10.21	□□□□□ -0.77
CDK5RAP3-231	ENST00000584063	IGKV1D-43	A0A0B4J1Z2	117 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SLC25A12	O75746	678 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	BGLAP	P02818	100 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	IGKV3-11	P04433	115 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PPIC	P45877	212 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PLCXD2	Q0VAA5	305 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PPP1R1A	Q13522	171 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	GAMT	Q14353	236 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	EBP	Q15125	230 aa	Known RBP	10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CBLN2	Q8IUK8	224 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PUSL1	Q8N0Z8	303 aa	Known RBP	10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR2D3	Q8NGH3	330 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR1S2	Q8NGQ3	325 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RHBDD1	Q8TEB9	315 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SPSB1	Q96BD6	273 aa		10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PURG	Q9UJV8	347 aa	Known RBP	10.21	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	WIPF3	A6NGB9	483 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	KRBOX1	C9JBD0	128 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SLC17A2	O00624	439 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PMP2	P02689	132 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	CCL4	P13236	92 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TDGF1	P13385	188 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PMEL	P40967	661 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PMPCA	Q10713	525 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR13C8	Q8NGS7	320 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ABHD3	Q8WU67	409 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	BCL2L2	Q92843	193 aa	Predicted RBP	10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR5B2	Q96R09	309 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	RHOF	Q9HBH0	211 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TRAV26-1	A0A087WT03	109 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TRBV11-1	A0A0K0K1C0	115 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063		H3BMH7	237 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PNMT	P11086	282 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ANOS1	P23352	680 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PTGFR	P43088	359 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	MRPS10	P82664	201 aa	Known RBP	10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	NAAA	Q02083	359 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	INPP5J	Q15735	1006 aa	Predicted RBP	10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	GUCA2B	Q16661	112 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	TMEM177	Q53S58	311 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR2W3	Q7Z3T1	314 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZBTB8A	Q96BR9	441 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	FGGY	Q96C11	551 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR8B4	Q96RC9	309 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF587	Q96SQ5	575 aa	Predicted RBP	10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	ZNF160	Q9HCG1	818 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	OR2S2	Q9NQN1	319 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	COPS7A	Q9UBW8	275 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	IL17B	Q9UHF5	180 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	PADI1	Q9ULC6	663 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	VDAC3	Q9Y277	283 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063		A0A0B4J2A0	478 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	LOC107986453	A0A1B0GWG9	222 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	KANTR	A0A1W2PQU2	76 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	HMSD	A8MTL9	139 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SPP1	P10451	314 aa		10.2	□□□□□ -0.78
CDK5RAP3-231	ENST00000584063	SLC25A1	P53007	311 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms