RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 SNRPBP14678 240 aaKnown RBP13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ARSBP15848 533 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CFHR2P36980 270 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 QRFPP83859 136 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 WDR82Q6UXN9 313 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR10Z1Q8NGY1 313 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 Q8TCH9 128 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 AP3S1Q92572 193 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 S100A13Q99584 98 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TMUB1Q9BVT8 246 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 METTL9Q9H1A3 318 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SAP30LQ9HAJ7 183 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR5V1Q9UGF6 321 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 POLDIP2Q9Y2S7 368 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 A3GALT2U3KPV4 340 aa13.8□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MAP1AP78559 2803 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 AKAP6Q13023 2319 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 NOS1APO75052 506 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 KDM4BO94953 1096 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CYB5AP00167 134 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CD99P14209 185 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 HOXB4P17483 251 aaPredicted RBP13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CDKN1AP38936 164 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CAPZA1P52907 286 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SCAND1P57086 179 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ZNF404Q494X3 552 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 Q8NFD4 153 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR5H6Q8NGV6 325 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SLAMF9Q96A28 289 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 LIME1Q9H400 295 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 IL36GQ9NZH8 169 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 FBLN5Q9UBX5 448 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SPATA2Q9UM82 520 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PPP1R3CQ9UQK1 317 aa13.79□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ACANP16112 2415 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TMEM272A0A1B0GTI8 110 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TMEM14DPA8MWL7 114 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 F8VVB4 439 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 F8VWA3 439 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 TRAPPC2LH3BP13 241 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ZNF780AO75290 641 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 LHBP01229 141 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PGA5P0DJD9 388 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 BCL3P20749 454 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 NPBWR2P48146 333 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ERVK11-1P61568 191 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 GPR176Q14439 515 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 RSU1Q15404 277 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SLC22A6Q4U2R8 563 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ELP2Q6IA86 826 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR10K2Q6IF99 312 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MZT2AQ6P582 158 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR2W3Q7Z3T1 314 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 OR10K1Q8NGX5 313 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MCFD2Q8NI22 146 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ZNF488Q96MN9 340 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 CCL19Q99731 98 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 MMP27Q9H306 513 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 SMURF1Q9HCE7 757 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 PCDHB16Q9NRJ7 776 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 COMMD3Q9UBI1 195 aa13.78□□□□□ -0.2
CDK5RAP3-228ENST00000583363 hCG_1807616A0A1W2PRN6 198 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CTDSP2O14595 271 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 DYSFO75923 2080 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 HTR3BO95264 441 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 F12P00748 615 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SFTPBP07988 381 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 COL8A2P25067 703 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 BMXP51813 675 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PLA2G7Q13093 441 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ZNF181Q2M3W8 571 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 POC1AQ8NBT0 407 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 OR11L1Q8NGX0 322 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 KCNG3Q8TAE7 436 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LGALS14Q8TCE9 139 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 LRRC29Q8WV35 223 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PTX4Q96A99 478 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CEP19Q96LK0 163 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 NRIP2Q9BQI9 281 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 KCNK15Q9H427 330 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RHOFQ9HBH0 211 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 TREM2Q9NZC2 230 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 PTTG2Q9NZH5 202 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RNF7Q9UBF6 113 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RAB22AQ9UL26 194 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 ETV7Q9Y603 341 aa13.77□□□□□ -0.21
CDK5RAP3-228ENST00000583363 IGHV1-69-2A0A0G2JMI3 117 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 A0A1W2PP11 408 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 IFNL4K9M1U5 179 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 AKR7A2O43488 359 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CDC14BO60729 498 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 CSTBP04080 98 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 SERPINA2P20848 420 aa13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 RBMXP38159 391 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 MRPS11P82912 194 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-228ENST00000583363 UNC119Q13432 240 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms