RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 RFPL4AA6NLU0 287 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 KLLNB2CW77 178 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 C4orf51C9J302 202 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 RFPL4AL1F8VTS6 287 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 NPIPA3F8WFD2 350 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SULT1C2O00338 296 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 KPNA3O00505 521 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ERI3O43414 337 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SDC3O75056 442 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DNAJB6O75190 326 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 RP2O75695 350 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 GLSO94925 669 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 NDUFB2O95178 105 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CD8AP01732 235 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 HOXC4P09017 264 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4L2P0CJ85 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4L3P0CJ86 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4L5P0CJ88 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4L6P0CJ89 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4L7P0CJ90 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC25A4P12235 298 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ICAM2P13598 275 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ADRB3P13945 408 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 MGMTP16455 207 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF3P17036 446 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 EDNRAP25101 427 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 PSMB5P28074 263 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 HTR2AP28223 471 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CMPK1P30085 196 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 AGTR1P30556 359 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 FAUP35544 74 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CCR2P41597 374 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DHPSP49366 369 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 P2RX1P51575 399 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC25A1P53007 311 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CLDN15P56746 228 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 RPS15AP62244 130 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 FLI1Q01543 452 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 FGL1Q08830 312 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF415Q09FC8 603 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CRMP1Q14194 572 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 PON3Q15166 354 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUSP5Q16690 384 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 MICBQ29980 383 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ITPRIPL2Q3MIP1 535 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 LINC00303Q3SY05 128 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CLVS2Q5SYC1 327 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 C10orf91Q5T1B1 145 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF660Q6AZW8 331 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5M10Q6IEU7 315 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC25A47Q6Q0C1 308 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 UQCC3Q6UW78 93 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 LRRN1Q6UXK5 716 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 STAC2Q6ZMT1 411 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DPY19L2P2Q6ZN68 376 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 FCRLAQ7L513 359 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SSX6Q7RTT6 188 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 PAQR7Q86WK9 346 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC35F2Q8IXU6 374 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 LRRC25Q8N386 305 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 KCNRGQ8N5I3 272 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 BCORP1Q8N888 145 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CDRT4Q8N9R6 151 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 NPEPL1Q8NDH3 523 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2L3Q8NG85 312 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR7G2Q8NG99 324 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR13C2Q8NGS9 318 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR9A2Q8NGT5 310 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR6N1Q8NGY5 312 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR1S1Q8NH92 325 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF671Q8TAW3 534 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SYNPRQ8TBG9 265 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 FANK1Q8TC84 345 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 PHLDA1Q8WV24 401 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 KLK6Q92876 244 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 CDS1Q92903 461 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 MRPS24Q96EL2 167 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 PHYHIPLQ96FC7 376 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 MS4A4EQ96PG1 132 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DERL3Q96Q80 235 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 GPX7Q96SL4 187 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 TBX5Q99593 518 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SEC22CQ9BRL7 303 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OR51V1Q9H2C8 321 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 RIMS4Q9H426 269 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 NCOR1P1Q9H4R4 102 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 KIR3DX1Q9H7L2 352 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 Q9H8V8 135 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 MCCC2Q9HCC0 563 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 LYRM4Q9HD34 91 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 EXOSC3Q9NQT5 275 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC17A5Q9NRA2 495 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 PHPT1Q9NRX4 125 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 FGF21Q9NSA1 209 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 RASL12Q9NYN1 266 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 DUX4Q9UBX2 424 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 KLK11Q9UBX7 282 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 OPN4Q9UHM6 478 aa3.22□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF107Q9UII5 783 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms