RNA–Protein interactions for RNA: ENST00000580958.5

SS18-217, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 775 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-217ENST00000580958 GCH1P30793 250 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 NPBWR2P48146 333 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 FABP6P51161 128 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 CCR6P51684 374 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 GNG2P59768 71 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 GNG3P63215 75 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 OR8G1Q15617 311 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 CARTPTQ16568 116 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 PNLIPRP3Q17RR3 467 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 SFRP4Q6FHJ7 346 aaPredicted RBP8.98□□□□□ -0.97
SS18-217ENST00000580958 RGS7BPQ6MZT1 257 aaPredicted RBP8.98□□□□□ -0.97
SS18-217ENST00000580958 HAGHLQ6PII5 290 aaPredicted RBP8.98□□□□□ -0.97
SS18-217ENST00000580958 PLET1Q6UQ28 207 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 SAXO1Q8IYX7 474 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 FBXL14Q8N1E6 418 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 OSR2Q8N2R0 312 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 OR4C16Q8NGL9 310 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 OR8S1Q8NH09 359 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 RTL8AQ9BWD3 113 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 SPEF1Q9Y4P9 236 aa8.98□□□□□ -0.97
SS18-217ENST00000580958 FAM90A27PA6NNH2 459 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ATP6V1G2-DDX39BF2Z307 99 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 H0YL77 283 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 MLNRO43193 412 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 WIPF1O43516 503 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 CYB5AP00167 134 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 THBDP07204 575 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 AKAIN1P0CW23 69 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 CD40P25942 277 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 RCVRNP35243 200 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ASCL1P50553 236 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 TAS2R19P59542 299 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ACTBP60709 375 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ACTG1P63261 375 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ADORA2A-AS1P86434 159 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 TAF9Q16594 264 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 MSMPQ1L6U9 139 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 PIGYQ3MUY2 71 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 NKAPLQ5M9Q1 402 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 MBNL2Q5VZF2 373 aaKnown RBP8.97□□□□□ -0.97
SS18-217ENST00000580958 FAAP20Q6NZ36 180 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 WDR86Q86TI4 376 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ZNF573Q86YE8 665 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 MKXQ8IYA7 352 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 C1orf174Q8IYL3 243 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 TMEM229BQ8NBD8 167 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 OR8G5Q8NG78 346 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ST8SIA4Q92187 359 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 UPRTQ96BW1 309 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 RADILQ96JH8 1075 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 CACNG6Q9BXT2 260 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 OR10A4Q9H209 315 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 OR51I2Q9H344 312 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 PCDHB16Q9NRJ7 776 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 TMEM100Q9NV29 134 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 MCUBQ9NWR8 336 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 TAS2R8Q9NYW2 309 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 ZNF581Q9P0T4 197 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 KCNK7Q9Y2U2 307 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 NOP16Q9Y3C1 178 aaKnown RBP8.97□□□□□ -0.97
SS18-217ENST00000580958 HIVEP3Q5T1R4 2406 aa8.97□□□□□ -0.97
SS18-217ENST00000580958 TRAV6A0A075B6T7 132 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 A0A0B4J293 547 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 F8VVB4 439 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 F8VWA3 439 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 INMT-MINDY4F8WBC2 141 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 TRAPPC2LH3BP13 241 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 J3QT63 122 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 GEMIN2O14893 280 aaKnown RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 ATXN7O15265 892 aaPredicted RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 AKR7A2O43488 359 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 CD3DP04234 171 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 TCRBP04435 133 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 FAUP35544 74 aaKnown RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 GLRXP35754 106 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 SNU13P55769 128 aaKnown RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 RBM11P57052 281 aaKnown RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 NKX6-1P78426 367 aaPredicted RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 ARFRP1Q13795 201 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 SIGIRRQ6IA17 410 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 STEAP1BQ6NZ63 245 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 VHLLQ6RSH7 139 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 Q6ZR03 302 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 BTN2A1Q7KYR7 527 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 C6orf201Q7Z4U5 140 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 TMEM200AQ86VY9 491 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 LRP11Q86VZ4 500 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 GVQW1Q8N7I0 195 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 Q8NFD4 153 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 OR10AD1Q8NGE0 317 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 OR4D10Q8NGI6 311 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 CREB3L1Q96BA8 519 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 MRPS24Q96EL2 167 aaKnown RBP8.96□□□□□ -0.98
SS18-217ENST00000580958 ZNF488Q96MN9 340 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 MARVELD1Q9BSK0 173 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 PKIBQ9C010 78 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 IFT46Q9NQC8 304 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.96□□□□□ -0.98
SS18-217ENST00000580958 MTCH1Q9NZJ7 389 aa8.96□□□□□ -0.98
SS18-217ENST00000580958 ST3GAL6Q9Y274 331 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms