RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MNS1Q8NEH6 495 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 OR11H1Q8NG94 326 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 OR10A6Q8NH74 314 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNRF4Q8WWF5 429 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 UTP4Q969X6 686 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNF488Q96MN9 340 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 CLEC7AQ9BXN2 247 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 IFT22Q9H7X7 185 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 RPRD1BQ9NQG5 326 aaKnown RBP5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 BAG5Q9UL15 447 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 RABL2BQ9UNT1 228 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 MPC1Q9Y5U8 109 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 SIRT4Q9Y6E7 314 aaPredicted RBP5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 SESN1Q9Y6P5 492 aa5.95□□□□□ -1.46
SMARCE1-217ENST00000580654 OR6C68A6NDL8 312 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A18PA6NE21 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A16PA6NEW6 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 TVP23AA6NH52 213 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 A6NHS1 94 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A20PA6NIJ5 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A9PA6NNJ1 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A12PA8MX19 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A5PA8MXJ8 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 B2RBV5 119 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 SLC1A7O00341 560 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 DEDDO75618 318 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 CST4P01036 141 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 IGHG2P01859 326 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 HLA-DQA2P01906 255 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A15PP0C7V4 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A13PP0C7W8 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A14PP0C7W9 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM90A24PP0C7X0 464 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 MED14OSP0DP75 135 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 GPM6AP51674 278 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 SLC7A2P52569 658 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 TMED1Q13445 227 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 TRAM2Q15035 370 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 TIGD6Q17RP2 521 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 SMARCD3Q6STE5 483 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 DPY19L2P2Q6ZN68 376 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 DCXRQ7Z4W1 244 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNF676Q8N7Q3 588 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 CSNK2A3Q8NEV1 391 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 C4orf3Q8WVX3 66 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 AQP3Q92482 292 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 PIGCQ92535 297 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM46AQ96IP4 442 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 RSRC1Q96IZ7 334 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNF714Q96N38 554 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 CGREF1Q99674 301 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM110AQ9BQ89 295 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 COPS4Q9BT78 406 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 TMEM133Q9H2Q1 129 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 PAPOLBQ9NRJ5 636 aaKnown RBP5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 THAP1Q9NVV9 213 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 DPM3Q9P2X0 92 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 KCNG2Q9UJ96 466 aa5.94□□□□□ -1.46
SMARCE1-217ENST00000580654 MAGEA13PA6NCF6 341 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 LY6LH3BQJ8 138 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 H3BSH0 61 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 K7N7A8 449 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 INMTO95050 263 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 IGLV1-47P01700 117 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 IFNA6P05013 189 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 ANXA2P07355 339 aaKnown RBP5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 HIST1H1CP16403 213 aaKnown RBP5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 RHCEP18577 417 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 PYCR1P32322 319 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 CX3CR1P49238 355 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 POU3F4P49335 361 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 RPS6KA3P51812 740 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 STX1BP61266 288 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 BDH1Q02338 343 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 CFHR3Q02985 330 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 GPR50Q13585 617 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 KIAA0141Q14154 515 aaPredicted RBP5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 PNLIPRP3Q17RR3 467 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 AGKQ53H12 422 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM53AQ6NSI3 398 aaPredicted RBP5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 EPGNQ6UW88 154 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 ZNF730Q6ZMV8 503 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 SLC35E3Q7Z769 313 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 BATF2Q8N1L9 274 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 MREGQ8N565 214 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 POC1AQ8NBT0 407 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 OR8H1Q8NGG4 311 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 OR4K13Q8NH42 304 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 DCUN1D4Q92564 292 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 ST6GALNAC6Q969X2 333 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 SLAMF6Q96DU3 332 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 ERMAPQ96PL5 475 aaPredicted RBP5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 FNDC11Q9BVV2 318 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 SSU72Q9NP77 194 aaKnown RBP5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 CENPMQ9NSP4 180 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 MRGBPQ9NV56 204 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 RASL12Q9NYN1 266 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 FAT2Q9NYQ8 4349 aa5.93□□□□□ -1.46
SMARCE1-217ENST00000580654 FAM172BPA6NC97 362 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms