RNA–Protein interactions for RNA: ENST00000580170.5

PTPRM-211, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRM, Length 5,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-211ENST00000580170 UQCC1Q9NVA1 299 aa19.02■□□□□ 0.64
PTPRM-211ENST00000580170 CD200P41217 278 aa19.02■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF774Q6NX45 483 aa19.02■□□□□ 0.63
PTPRM-211ENST00000580170 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.02■□□□□ 0.63
PTPRM-211ENST00000580170 GNRHR2Q96P88 292 aa19.02■□□□□ 0.63
PTPRM-211ENST00000580170 PLA2G2FQ9BZM2 168 aa19.02■□□□□ 0.63
PTPRM-211ENST00000580170 IGHV5-51A0A0C4DH38 117 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF250P15622 560 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 TMEM241Q24JQ0 296 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF784Q8NCA9 323 aaPredicted RBP19.01■□□□□ 0.63
PTPRM-211ENST00000580170 EID2BQ96D98 161 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 CNTD2Q9H8S5 307 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 ERRFI1Q9UJM3 462 aaPredicted RBP19.01■□□□□ 0.63
PTPRM-211ENST00000580170 ANKRD20A5PA0PJZ0 165 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 DUS4LO95620 317 aaKnown RBP19.01■□□□□ 0.63
PTPRM-211ENST00000580170 GP1BAP07359 652 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 CISD3P0C7P0 127 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 SCAND1P57086 179 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 STUMQ69YW2 141 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 OR2A5Q96R48 311 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 PLA2G3Q9NZ20 509 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 KIAA1324LA8MWY0 1029 aaPredicted RBP19.01■□□□□ 0.63
PTPRM-211ENST00000580170 SOX15O60248 233 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 PGA3P0DJD8 388 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 MPPED2Q15777 294 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 TMEM215Q68D42 235 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 GPR137Q96N19 417 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 MARVELD1Q9BSK0 173 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 CDC42EP2O14613 210 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 GPR87Q9BY21 358 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF275Q9NSD4 429 aaPredicted RBP19.01■□□□□ 0.63
PTPRM-211ENST00000580170 MPC2O95563 127 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 NGFP01138 241 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 CBLN2Q8IUK8 224 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 OR5C1Q8NGR4 320 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 OCIAD1Q9NX40 245 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 TAAR3PQ9P1P4 343 aa19.01■□□□□ 0.63
PTPRM-211ENST00000580170 DOCK2Q92608 1830 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 DEFB108AA8MXU0 73 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 C1QAP02745 245 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 AMTP48728 403 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 SLC38A11Q08AI6 406 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 MRM1Q6IN84 353 aaKnown RBP19■□□□□ 0.63
PTPRM-211ENST00000580170 PET117Q6UWS5 81 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 MOB3BQ86TA1 216 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 PACRGQ96M98 296 aaPredicted RBP19■□□□□ 0.63
PTPRM-211ENST00000580170 RASL12Q9NYN1 266 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 LINC01387J3KSC0 135 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 PLPP3O14495 311 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 OR11G2Q8NGC1 345 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF391Q9UJN7 358 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 ST8SIA5O15466 376 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 CA6P23280 308 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 LPAR6P43657 344 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 Q7L0L9 218 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 TRGV5A0A0B4J1U4 118 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 OR2J3O76001 311 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 FBP1P09467 338 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 NAT2P11245 290 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 NHLH1Q02575 133 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 NHLH2Q02577 135 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 LHFPL5Q8TAF8 219 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 ALG14Q96F25 216 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 GSX1Q9H4S2 264 aaPredicted RBP19■□□□□ 0.63
PTPRM-211ENST00000580170 NAA60Q9H7X0 242 aa19■□□□□ 0.63
PTPRM-211ENST00000580170 TCRBV16S1A1N1A0A5B0 115 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF98A6NK75 572 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 BCORQ6W2J9 1755 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 GNG10P50151 68 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 MPZL1O95297 269 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 CT62P0C5K7 136 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 OR2T6Q8NHC8 308 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 KCNK15Q9H427 330 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 HES4Q9HCC6 221 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 TRGV8A0A0C4DH27 118 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 FAM3AP98173 230 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 ZNF141Q15928 474 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 TMEM97Q5BJF2 176 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 C9orf50Q5SZB4 431 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 MOB3AQ96BX8 217 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 A0A1W2PR80 420 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 MED19A0JLT2 244 aaPredicted RBP18.99■□□□□ 0.63
PTPRM-211ENST00000580170 FAM24AA6NFZ4 105 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 FZD5Q13467 585 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 LRRC10Q5BKY1 277 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 RAB40CQ96S21 281 aa18.99■□□□□ 0.63
PTPRM-211ENST00000580170 HMSDA8MTL9 139 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 GUSBP11Q6P575 273 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 DEGS2Q6QHC5 323 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 FZR1Q9UM11 496 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 A0A1B0GTQ1 180 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 TMEM218A2RU14 115 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 NDUFB3O43676 98 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 VMA21Q3ZAQ7 101 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 UBALD2Q8IYN6 164 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 ABHD1Q96SE0 405 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 TMEM9BQ9NQ34 198 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 OR5H15A6NDH6 313 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 FCGR3BO75015 233 aa18.98■□□□□ 0.63
PTPRM-211ENST00000580170 SELENOPP49908 381 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms