RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 FOXD3Q9UJU5 478 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-209ENST00000580095 PINLYPA6NC86 204 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 AGPAT2O15120 278 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 GPR37O15354 613 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 ACTL6AO96019 429 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 TBPP20226 339 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 CCNOP22674 350 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 FOLR3P41439 243 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 HTR5AP47898 357 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 GSK3AP49840 483 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 MLF1P58340 268 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 EXT1Q16394 746 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 C10orf128Q5T292 105 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 OR2A2Q6IF42 318 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 FAHD2BQ6P2I3 314 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 HAS2Q92819 552 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 FAHD2AQ96GK7 314 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 OR51M1Q9H341 326 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 MIOXQ9UGB7 285 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 OSGIN2Q9Y236 505 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 LAMA5O15230 3695 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 LOC102725191A0A1B0GVB3 256 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 GEMIN2O14893 280 aaKnown RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 SNAPC5O75971 98 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 ONECUT2O95948 504 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 SCGB1D2O95969 90 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 CSTBP04080 98 aaKnown RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 TCN2P20062 427 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 NOVA1P51513 510 aaKnown RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF84P51523 738 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 RAC1P63000 192 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 AIMP2Q13155 320 aaKnown RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 RSU1Q15404 277 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 GUCA2BQ16661 112 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 SPINK14Q6IE38 97 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 OR5T2Q8NGG2 359 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 SPTSSAQ969W0 71 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 NAA11Q9BSU3 229 aaPredicted RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 NIT2Q9NQR4 276 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 CYTL1Q9NRR1 136 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 NXT1Q9UKK6 140 aaKnown RBP9.13□□□□□ -0.95
TOP3A-209ENST00000580095 FAM96BQ9Y3D0 163 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 V9GYS6 101 aa9.13□□□□□ -0.95
TOP3A-209ENST00000580095 TEX13DA0A0J9YY54 714 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-209ENST00000580095 A0A0U1RQV5 110 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 FIGNL2A6NMB9 653 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 FOXI3A8MTJ6 420 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-209ENST00000580095 CBR3O75828 277 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 FPR2P25090 351 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 THBS4P35443 961 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 ID4P47928 161 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 CLDN15P56746 228 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 B3GALT5-AS1P59052 145 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 TAS2R31P59538 309 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 RIPPLY1Q0D2K3 151 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 CEACAM16Q2WEN9 425 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 LHFPL1Q86WI0 220 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 OR10D3Q8NH80 312 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 MARS2Q96GW9 593 aaKnown RBP9.12□□□□□ -0.95
TOP3A-209ENST00000580095 POM121Q96HA1 1249 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 HRH4Q9H3N8 390 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 AK3Q9UIJ7 227 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 PCDHGA1Q9Y5H4 931 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 A0A096LPE4 126 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 IGKV1-12A0A0C4DH73 117 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 A0A1W2PPZ6 126 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF850A8MQ14 1090 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 FBXO24O75426 580 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 IGKV1D-12P01611 117 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 IGLV3-1P01715 115 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 P04436 131 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 SMIM6P0DI80 62 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 CPT2P23786 658 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 PNLIPRP3Q17RR3 467 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 IAH1Q2TAA2 248 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF528Q3MIS6 628 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 PHLDA2Q53GA4 152 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 RPUSD3Q6P087 351 aaKnown RBP9.12□□□□□ -0.95
TOP3A-209ENST00000580095 AAED1Q7RTV5 226 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 TIPARPQ7Z3E1 657 aaKnown RBP9.12□□□□□ -0.95
TOP3A-209ENST00000580095 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 GPHA2Q96T91 129 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 SULT4A1Q9BR01 284 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 HES7Q9BYE0 225 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 ANAPC10Q9UM13 185 aa9.12□□□□□ -0.95
TOP3A-209ENST00000580095 A0A087WZY1 265 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF587BE7ETH6 402 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 WRBO00258 174 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 TERTO14746 1132 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 CELA3AP09093 270 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 EDN3P14138 238 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 CTSSP25774 331 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 OTX1P32242 354 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 PSG4Q00888 419 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF92Q03936 586 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ZFP36L1Q07352 338 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms