RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 ZNF254O75437 659 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 MPIG6BO95866 241 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 CST1P01037 141 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 IGLV3-1P01715 115 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 RBP4P02753 201 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 MRPL3P09001 348 aaKnown RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 RAP2AP10114 183 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 SLC2A5P22732 501 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 VDAC2P45880 294 aaPredicted RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 MNAT1P51948 309 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 RIDAP52758 137 aaKnown RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 ESRRGP62508 458 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 MFGE8Q08431 387 aaPredicted RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 DYNC1I2Q13409 638 aaKnown RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 APOFQ13790 326 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 TRIM25Q14258 630 aaKnown RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 CLVS2Q5SYC1 327 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 ZNF626Q68DY1 528 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 ASRGL1Q7L266 308 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 ARHGAP24Q8N264 748 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 ASCC1Q8N9N2 400 aaKnown RBP9.51□□□□□ -0.89
CDH8-202ENST00000577228 OR11H6Q8NGC7 330 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 TTTY10Q9BZA0 68 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 ZNF556Q9HAH1 456 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 GPR173Q9NS66 373 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 IKZF2Q9UKS7 526 aa9.51□□□□□ -0.89
CDH8-202ENST00000577228 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.51□□□□□ -0.89
CDH8-202ENST00000577228 MEX3AA1L020 520 aaKnown RBP9.5□□□□□ -0.89
CDH8-202ENST00000577228 PRR32B1ATL7 298 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 B2RBV5 119 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 K7N7A8 449 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 TTRP02766 147 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 ZNF728P0DKX0 622 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 OSMP13725 252 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 IGLL1P15814 213 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 MPZP25189 248 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 DYNLT3P51808 116 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 EDDM3BP56851 147 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 OR12D2P58182 307 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 BLCAPP62952 87 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 CDK5Q00535 292 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 MS4A2Q01362 244 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 ROM1Q03395 351 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 COL10A1Q03692 680 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 TMEM95Q3KNT9 176 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 VAX1Q5SQQ9 334 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 LDLRAD2Q5SZI1 272 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 LCN1P1Q5VSP4 162 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 TMEM42Q69YG0 159 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 Q6ZS46 218 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 TMEM179BQ7Z7N9 219 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 ZNF679Q8IYX0 411 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 ASB17Q8WXJ9 295 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 NSL1Q96IY1 281 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 LRGUKQ96M69 825 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 CHID1Q9BWS9 393 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 TEX12Q9BXU0 123 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 HES4Q9HCC6 221 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 GTF2A1LQ9UNN4 478 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 SLC22A13Q9Y226 551 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 TMEM14AQ9Y6G1 99 aa9.5□□□□□ -0.89
CDH8-202ENST00000577228 LOC110117498-PIK3R3F6TDL0 507 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 DLGAP1O14490 977 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 GNGT2O14610 69 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 E2F6O75461 281 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 CHRM2P08172 466 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 IGHV1-8P0DP01 117 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 PF4V1P10720 104 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 SLC34A1Q06495 639 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 MINOS1Q5TGZ0 78 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 GDPD3Q7L5L3 318 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 WFDC9Q8NEX5 89 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 OR5AU1Q8NGC0 362 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 NDNFQ8TB73 568 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 ZNF714Q96N38 554 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 MOB1AQ9H8S9 216 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 SLC25A19Q9HC21 320 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDH8-202ENST00000577228 COPS3Q9UNS2 423 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 HILPDAQ9Y5L2 63 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 MINOS1-NBL1R4GNA1 71 aa9.49□□□□□ -0.89
CDH8-202ENST00000577228 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 CCDC182A6NF36 153 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 K7EIL1 84 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 ZNF737O75373 536 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 PF4P02776 101 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 JUNBP17275 347 aaPredicted RBP9.48□□□□□ -0.89
CDH8-202ENST00000577228 CALB2P22676 271 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 AZGP1P25311 298 aaKnown RBP9.48□□□□□ -0.89
CDH8-202ENST00000577228 ERVK11-1P61568 191 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 ACTA2P62736 377 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 ACTG2P63267 376 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 ACTC1P68032 377 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 ACTA1P68133 377 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 CD83Q01151 205 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 MEF2CQ06413 473 aaPredicted RBP9.48□□□□□ -0.89
CDH8-202ENST00000577228 IL24Q13007 206 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 SNAPC1Q16533 368 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 BCL2L15Q5TBC7 163 aa9.48□□□□□ -0.89
CDH8-202ENST00000577228 TMEM236Q5W0B7 351 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms