RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ACTA2P62736 377 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 RPL31P62899 125 aaKnown RBP12.74□□□□□ -0.37
SF3B3-215ENST00000577085 ACTG2P63267 376 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF85Q03923 595 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 PRB3Q04118 309 aaPredicted RBP12.74□□□□□ -0.37
SF3B3-215ENST00000577085 IL24Q13007 206 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 OCLNQ16625 522 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 SLC25A30Q5SVS4 291 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 TMEM244Q5VVB8 128 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 Q6ZSR3 168 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 PIP4P2Q8N4L2 257 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 ACBD7Q8N6N7 88 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 CD177Q8N6Q3 437 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 PP6455Q8WZ26 134 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 DYRK2Q92630 601 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 C10orf35Q96D05 121 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 CHST5Q9GZS9 411 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 BEX1Q9HBH7 125 aa12.74□□□□□ -0.37
SF3B3-215ENST00000577085 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 SLC16A6O15403 523 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 INMTO95050 263 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 BAG2O95816 211 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 KNG1P01042 644 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 HTR1AP08908 422 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 MDKP21741 143 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-215ENST00000577085 MPZP25189 248 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 IER3P46695 156 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 CEBPDP49716 269 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-215ENST00000577085 UBE2E1P51965 193 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 RAG2P55895 527 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 KLRD1Q13241 179 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 ZBTB49Q6ZSB9 765 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 CALHM1Q8IU99 346 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 RDH10Q8IZV5 341 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 Q8N7P7 452 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 ASCC1Q8N9N2 400 aaKnown RBP12.73□□□□□ -0.37
SF3B3-215ENST00000577085 TAF15Q92804 592 aaKnown RBP eCLIP12.73□□□□□ -0.37
SF3B3-215ENST00000577085 STMN2Q93045 179 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 CEP19Q96LK0 163 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 S100A14Q9HCY8 104 aa12.73□□□□□ -0.37
SF3B3-215ENST00000577085 SF3B6Q9Y3B4 125 aaKnown RBP12.73□□□□□ -0.37
SF3B3-215ENST00000577085 RNASEK-C17orf49H0YIS7 233 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 J3QLW9 94 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 ANGPTL7O43827 346 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF19P17023 458 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 RBP2P50120 134 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 ATP1B3P54709 279 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 DLX1P56177 255 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 OR12D2P58182 307 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 RPL15P61313 204 aaKnown RBP12.72□□□□□ -0.37
SF3B3-215ENST00000577085 ACSM1Q08AH1 577 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 UBE2V2Q15819 145 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 GDPGP1Q6ZNW5 385 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 SLC25A26Q70HW3 274 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 LDLRAD3Q86YD5 345 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 OR4M1Q8NGD0 313 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 OR2G2Q8NGZ5 317 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 MBOAT4Q96T53 435 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 C19orf12Q9NSK7 152 aa12.72□□□□□ -0.37
SF3B3-215ENST00000577085 SPRY1O43609 319 aaPredicted RBP12.71□□□□□ -0.37
SF3B3-215ENST00000577085 GPR137BO60478 399 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 FADS2O95864 444 aaKnown RBP12.71□□□□□ -0.37
SF3B3-215ENST00000577085 TK1P04183 234 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 SAA4P35542 130 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 KIR3DL2P43630 455 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 MTCP1P56278 107 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 ISL1P61371 349 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 EGFL6Q8IUX8 553 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 MKXQ8IYA7 352 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 Q8IYB0 196 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 PQLC1Q8N2U9 271 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF676Q8N7Q3 588 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 ZNF555Q8NEP9 628 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 OR13C3Q8NGS6 347 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 C4orf36Q96KX1 117 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 FAM234AQ9H0X4 552 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 NEK6Q9HC98 313 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 HES4Q9HCC6 221 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 C1RLQ9NZP8 487 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 FRRS1LQ9P0K9 344 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 HHLA2Q9UM44 414 aa12.71□□□□□ -0.37
SF3B3-215ENST00000577085 LOC100130705A0A1B0GUX0 176 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 ISG15P05161 165 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 CHRM2P08172 466 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 DBTP11182 482 aaKnown RBP12.7□□□□□ -0.38
SF3B3-215ENST00000577085 PIPP12273 146 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-215ENST00000577085 PRKACBP22694 351 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 LGALS4P56470 323 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 COL10A1Q03692 680 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 ZNF91Q05481 1191 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 TMEM200BQ69YZ2 307 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 DHRS7BQ6IAN0 325 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-215ENST00000577085 GDPD3Q7L5L3 318 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 ENTHD1Q8IYW4 607 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 PNKDQ8N490 385 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms