RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 C16orf82Q7Z2V1 217 aa13.96□□□□□ -0.17
CCDC40-211ENST00000574099 TRPM8Q7Z2W7 1104 aa13.96□□□□□ -0.17
CCDC40-211ENST00000574099 ZNF676Q8N7Q3 588 aa13.96□□□□□ -0.17
CCDC40-211ENST00000574099 OR51D1Q8NGF3 324 aa13.96□□□□□ -0.17
CCDC40-211ENST00000574099 NRIP2Q9BQI9 281 aa13.96□□□□□ -0.17
CCDC40-211ENST00000574099 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.96□□□□□ -0.17
CCDC40-211ENST00000574099 SLC22A13Q9Y226 551 aa13.96□□□□□ -0.17
CCDC40-211ENST00000574099 H0YHG0 523 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 GSC2O15499 205 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 CCDC22O60826 627 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 DNAJC8O75937 253 aaPredicted RBP13.95□□□□□ -0.18
CCDC40-211ENST00000574099 THBS3P49746 956 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 DGCR2P98153 550 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 NKAPLQ5M9Q1 402 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 ZNF684Q5T5D7 378 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 C18orf65Q6ZTR6 163 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 KRT74Q7RTS7 529 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 KRT77Q7Z794 578 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 ZNF454Q8N9F8 522 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 OR51E1Q8TCB6 317 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 ASCL2Q99929 193 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 LIN7BQ9HAP6 207 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 GPR84Q9NQS5 396 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 GPR173Q9NS66 373 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 ENPP5Q9UJA9 477 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 POLDIP2Q9Y2S7 368 aa13.95□□□□□ -0.18
CCDC40-211ENST00000574099 A0A0U1RQV5 110 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 NRASP01111 189 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 HMGA2P52926 109 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 UNQ9370/PRO34162Q6UXP9 181 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 C8orf86Q6ZUL3 223 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 ASRGL1Q7L266 308 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 PIGWQ7Z7B1 504 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 ZNF329Q86UD4 541 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 ZNF573Q86YE8 665 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 TPRX1Q8N7U7 411 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 TEX47Q8TBZ9 253 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 STMN2Q93045 179 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 MCRIP2Q9BUT9 160 aaKnown RBP13.94□□□□□ -0.18
CCDC40-211ENST00000574099 CLEC7AQ9BXN2 247 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 HES4Q9HCC6 221 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 FAM206AQ9NX38 181 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 SESN1Q9Y6P5 492 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 RYR2Q92736 4967 aa13.94□□□□□ -0.18
CCDC40-211ENST00000574099 TMEM269A0A1B0GVZ9 245 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 NUDT19A8MXV4 375 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 NOS1APO75052 506 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-211ENST00000574099 ZNF737O75373 536 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 AMY1AP04745 511 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 AMY2AP04746 511 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 H2AFXP16104 143 aaPredicted RBP13.93□□□□□ -0.18
CCDC40-211ENST00000574099 HTR1DP28221 377 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 HCCSP53701 268 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 CBX1P83916 185 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 IL18R1Q13478 541 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 KLHL22Q53GT1 634 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 PLBD1Q6P4A8 553 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 HDXQ7Z353 690 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 OSR2Q8N2R0 312 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 OR4P4Q8NGL7 312 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 TEAD3Q99594 435 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 TTTY10Q9BZA0 68 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 PBOV1Q9GZY1 135 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 TMEM133Q9H2Q1 129 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 GAR1Q9NY12 217 aaKnown RBP13.93□□□□□ -0.18
CCDC40-211ENST00000574099 VNN3Q9NY84 501 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 U3KQV3 271 aa13.93□□□□□ -0.18
CCDC40-211ENST00000574099 DYNC2H1Q8NCM8 4307 aaKnown RBP13.93□□□□□ -0.18
CCDC40-211ENST00000574099 TENM2Q9NT68 2774 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 PSMB11A5LHX3 300 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 ATP6V1B1P15313 513 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 ESRRGP62508 458 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 RPL23AP62750 156 aaKnown RBP13.92□□□□□ -0.18
CCDC40-211ENST00000574099 BAIAP2L2Q6UXY1 529 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 ANGPTL5Q86XS5 388 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 OR8H2Q8N162 312 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 CMTM5Q96DZ9 223 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 RBM14Q96PK6 669 aaKnown RBP13.92□□□□□ -0.18
CCDC40-211ENST00000574099 DUX3Q96PT4 197 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 PRR25Q96S07 402 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 LAMP5Q9UJQ1 280 aa13.92□□□□□ -0.18
CCDC40-211ENST00000574099 EPPK1P58107 5090 aaKnown RBP13.91□□□□□ -0.18
CCDC40-211ENST00000574099 hADV38S2A0JD32 116 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 PQLC2LA1A4F0 135 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 FAM172BPA6NC97 362 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 A6NIN4 97 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 PRR23D1E9PI22 279 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-211ENST00000574099 H3BN98 237 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 MMP23AO75900 390 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 DHRS3O75911 302 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 OR2F2O95006 317 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 INMTO95050 263 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 PRR23D2P0DMB1 279 aaPredicted RBP13.91□□□□□ -0.18
CCDC40-211ENST00000574099 HSD17B1P14061 328 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 BRS3P32247 399 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 RAB25P57735 213 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 OR2W3Q7Z3T1 314 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 KLHL30-AS1Q8NEE0 82 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 TRMT10AQ8TBZ6 339 aaKnown RBP13.91□□□□□ -0.18
CCDC40-211ENST00000574099 NIPSNAP1Q9BPW8 284 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms