RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 UGT2B7P16662 529 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 ZNF7P17097 686 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 ATF1P18846 271 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 RCVRNP35243 200 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 LGALS7P47929 136 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 GCLMP48507 274 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 VEGFCP49767 419 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 PSMD7P51665 324 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 NKX2-5P52952 324 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 AP2S1P53680 142 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 CCL23P55773 120 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 HBG1P69891 147 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 HBG2P69892 147 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 PRDX1Q06830 199 aaKnown RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 CKAP4Q07065 602 aaKnown RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 MLLT11Q13015 90 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 IMPG1Q17R60 797 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 TCTEX1D4Q5JR98 221 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 TMEM31Q5JXX7 168 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 CLEC12AQ5QGZ9 265 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 SLC25A30Q5SVS4 291 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 KCTD16Q68DU8 428 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 DNM1P34Q6PK57 102 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 Q6ZTC4 211 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 FAM92BQ6ZTR7 304 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 GTSCR1Q86UQ5 136 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 C11orf53Q8IXP5 236 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 LRRC34Q8IZ02 419 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 DRAM1Q8N682 238 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 Q8N9W7 124 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 CCDC112Q8NEF3 446 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 OR4M2Q8NGB6 313 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 OR1J4Q8NGS1 313 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 ERMNQ8TAM6 284 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 FAM222BQ8WU58 562 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 RNF138Q8WVD3 245 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 FAM104AQ969W3 186 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 EXOSC8Q96B26 276 aaKnown RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 SLC35E1Q96K37 410 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 KCNS1Q96KK3 526 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 KCTD7Q96MP8 289 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 MBOAT7Q96N66 472 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 CAMK2N2Q96S95 79 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 NRTNQ99748 197 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 DHRS9Q9BPW9 319 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 TMEM208Q9BTX3 173 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 CHAC1Q9BUX1 264 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 UGT2B28Q9BY64 529 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 MRPL20Q9BYC9 149 aaKnown RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 MRPS26Q9BYN8 205 aaKnown RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 DERL2Q9GZP9 239 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 METTL9Q9H1A3 318 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 IFI27L2Q9H2X8 130 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 TPK1Q9H3S4 243 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 ASB8Q9H765 288 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 METTL17Q9H7H0 456 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 TRIM45Q9H8W5 580 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 NOX3Q9HBY0 568 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 HRASLSQ9HDD0 168 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 FBXO6Q9NRD1 293 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 TAS2R9Q9NYW1 312 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 COL5A2P05997 1499 aaPredicted RBP1.47□□□□□ -2.17
CHD3-217ENST00000574022 C9orf84Q5VXU9 1444 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 RIMS2Q9UQ26 1411 aa1.47□□□□□ -2.17
CHD3-217ENST00000574022 ZNFX1Q9P2E3 1918 aaKnown RBP1.46□□□□□ -2.18
CHD3-217ENST00000574022 MYO15BQ96JP2 1530 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 GPATCH8Q9UKJ3 1502 aaKnown RBP1.46□□□□□ -2.18
CHD3-217ENST00000574022 MAP3K15Q6ZN16 1313 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 NRCAMQ92823 1304 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 IGHV6-1A0A0B4J1U7 121 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 TRAV8-2A0A0B4J237 113 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 IGHV5-51A0A0C4DH38 117 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 LOC389332A0A1B0GUA5 103 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 TINCRA0A1B0GVN0 87 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 NKX2-6A6NCS4 301 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 OR6C70A6NIJ9 312 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 FAM183AA6NL82 134 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 CEACAM18A8MTB9 384 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 CENPBD1B2RD01 187 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 F5H5T6 163 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 PFDN6O15212 129 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 MAGEB4O15481 346 aaPredicted RBP1.46□□□□□ -2.18
CHD3-217ENST00000574022 SULT1B1O43704 296 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 STX10O60499 249 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 RBBP9O75884 186 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 RPP14O95059 124 aaKnown RBP1.46□□□□□ -2.18
CHD3-217ENST00000574022 LYPLA2O95372 231 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 SOX14O95416 240 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 ASS1P00966 412 aaKnown RBP1.46□□□□□ -2.18
CHD3-217ENST00000574022 CALB1P05937 261 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 RPS17P08708 135 aaKnown RBP1.46□□□□□ -2.18
CHD3-217ENST00000574022 OR4Q2P0C623 313 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 C8orf88P0DMB2 117 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 MLNP12872 115 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 SPNP16150 400 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 AKR1C4P17516 323 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 PRSS3P35030 304 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 ACOT2P49753 483 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 LHX2P50458 406 aa1.46□□□□□ -2.18
CHD3-217ENST00000574022 SLC18A1P54219 525 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms